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Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models

Lipid droplets are considered to be the hub for storage and metabolism of cellular lipids. In previous work we have phenotyped the lipidome of murine hepatocyte lipid droplets using liquid chromatography-mass spectrometry (UHPLC-MS) plus integrated MS/MS, followed by automatic analysis of the MS dat...

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Autores principales: Hartler, Jürgen, Köfeler, Harald C, Trötzmüller, Martin, Thallinger, Gerhard G, Spener, Friedrich
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4421934/
https://www.ncbi.nlm.nih.gov/pubmed/25977802
http://dx.doi.org/10.1038/sdata.2014.51
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author Hartler, Jürgen
Köfeler, Harald C
Trötzmüller, Martin
Thallinger, Gerhard G
Spener, Friedrich
author_facet Hartler, Jürgen
Köfeler, Harald C
Trötzmüller, Martin
Thallinger, Gerhard G
Spener, Friedrich
author_sort Hartler, Jürgen
collection PubMed
description Lipid droplets are considered to be the hub for storage and metabolism of cellular lipids. In previous work we have phenotyped the lipidome of murine hepatocyte lipid droplets using liquid chromatography-mass spectrometry (UHPLC-MS) plus integrated MS/MS, followed by automatic analysis of the MS data. The organelles were isolated after intervention studies involving nutritional stress (extended feeding of a high fat diet or short term fasting), genetic stress due to knock-out of adipocyte triglyceride lipase, or by combined application of nutritional and genetic stress together (‘super stress’). Lipidomics at the level of lipid species (profiling of lipid classes) and lipid molecular species (structural analysis in parallel) has unraveled clear lipid droplet phenotypes as judged by patterns seen best in triacylglycerol (TG) lipidomes, but also in diacylglycerol and phosphatidylcholine lipidomes. The combined view of these data presented here validates the methods used and provides high quality lipidomic data for further bioinformatic inspections. Examples are given for identification of TG species subsets considered surrogates for whole TG lipidomes.
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spelling pubmed-44219342015-05-14 Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models Hartler, Jürgen Köfeler, Harald C Trötzmüller, Martin Thallinger, Gerhard G Spener, Friedrich Sci Data Data Descriptor Lipid droplets are considered to be the hub for storage and metabolism of cellular lipids. In previous work we have phenotyped the lipidome of murine hepatocyte lipid droplets using liquid chromatography-mass spectrometry (UHPLC-MS) plus integrated MS/MS, followed by automatic analysis of the MS data. The organelles were isolated after intervention studies involving nutritional stress (extended feeding of a high fat diet or short term fasting), genetic stress due to knock-out of adipocyte triglyceride lipase, or by combined application of nutritional and genetic stress together (‘super stress’). Lipidomics at the level of lipid species (profiling of lipid classes) and lipid molecular species (structural analysis in parallel) has unraveled clear lipid droplet phenotypes as judged by patterns seen best in triacylglycerol (TG) lipidomes, but also in diacylglycerol and phosphatidylcholine lipidomes. The combined view of these data presented here validates the methods used and provides high quality lipidomic data for further bioinformatic inspections. Examples are given for identification of TG species subsets considered surrogates for whole TG lipidomes. Nature Publishing Group 2014-12-23 /pmc/articles/PMC4421934/ /pubmed/25977802 http://dx.doi.org/10.1038/sdata.2014.51 Text en Copyright © 2014, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0 This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0 Metadata associated with this Data Descriptor is available at http://www.nature.com/sdata/ and is released under the CC0 waiver to maximize reuse.
spellingShingle Data Descriptor
Hartler, Jürgen
Köfeler, Harald C
Trötzmüller, Martin
Thallinger, Gerhard G
Spener, Friedrich
Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models
title Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models
title_full Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models
title_fullStr Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models
title_full_unstemmed Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models
title_short Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models
title_sort assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4421934/
https://www.ncbi.nlm.nih.gov/pubmed/25977802
http://dx.doi.org/10.1038/sdata.2014.51
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