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Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models
Lipid droplets are considered to be the hub for storage and metabolism of cellular lipids. In previous work we have phenotyped the lipidome of murine hepatocyte lipid droplets using liquid chromatography-mass spectrometry (UHPLC-MS) plus integrated MS/MS, followed by automatic analysis of the MS dat...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4421934/ https://www.ncbi.nlm.nih.gov/pubmed/25977802 http://dx.doi.org/10.1038/sdata.2014.51 |
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author | Hartler, Jürgen Köfeler, Harald C Trötzmüller, Martin Thallinger, Gerhard G Spener, Friedrich |
author_facet | Hartler, Jürgen Köfeler, Harald C Trötzmüller, Martin Thallinger, Gerhard G Spener, Friedrich |
author_sort | Hartler, Jürgen |
collection | PubMed |
description | Lipid droplets are considered to be the hub for storage and metabolism of cellular lipids. In previous work we have phenotyped the lipidome of murine hepatocyte lipid droplets using liquid chromatography-mass spectrometry (UHPLC-MS) plus integrated MS/MS, followed by automatic analysis of the MS data. The organelles were isolated after intervention studies involving nutritional stress (extended feeding of a high fat diet or short term fasting), genetic stress due to knock-out of adipocyte triglyceride lipase, or by combined application of nutritional and genetic stress together (‘super stress’). Lipidomics at the level of lipid species (profiling of lipid classes) and lipid molecular species (structural analysis in parallel) has unraveled clear lipid droplet phenotypes as judged by patterns seen best in triacylglycerol (TG) lipidomes, but also in diacylglycerol and phosphatidylcholine lipidomes. The combined view of these data presented here validates the methods used and provides high quality lipidomic data for further bioinformatic inspections. Examples are given for identification of TG species subsets considered surrogates for whole TG lipidomes. |
format | Online Article Text |
id | pubmed-4421934 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-44219342015-05-14 Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models Hartler, Jürgen Köfeler, Harald C Trötzmüller, Martin Thallinger, Gerhard G Spener, Friedrich Sci Data Data Descriptor Lipid droplets are considered to be the hub for storage and metabolism of cellular lipids. In previous work we have phenotyped the lipidome of murine hepatocyte lipid droplets using liquid chromatography-mass spectrometry (UHPLC-MS) plus integrated MS/MS, followed by automatic analysis of the MS data. The organelles were isolated after intervention studies involving nutritional stress (extended feeding of a high fat diet or short term fasting), genetic stress due to knock-out of adipocyte triglyceride lipase, or by combined application of nutritional and genetic stress together (‘super stress’). Lipidomics at the level of lipid species (profiling of lipid classes) and lipid molecular species (structural analysis in parallel) has unraveled clear lipid droplet phenotypes as judged by patterns seen best in triacylglycerol (TG) lipidomes, but also in diacylglycerol and phosphatidylcholine lipidomes. The combined view of these data presented here validates the methods used and provides high quality lipidomic data for further bioinformatic inspections. Examples are given for identification of TG species subsets considered surrogates for whole TG lipidomes. Nature Publishing Group 2014-12-23 /pmc/articles/PMC4421934/ /pubmed/25977802 http://dx.doi.org/10.1038/sdata.2014.51 Text en Copyright © 2014, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0 This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0 Metadata associated with this Data Descriptor is available at http://www.nature.com/sdata/ and is released under the CC0 waiver to maximize reuse. |
spellingShingle | Data Descriptor Hartler, Jürgen Köfeler, Harald C Trötzmüller, Martin Thallinger, Gerhard G Spener, Friedrich Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models |
title | Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models |
title_full | Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models |
title_fullStr | Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models |
title_full_unstemmed | Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models |
title_short | Assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models |
title_sort | assessment of lipidomic species in hepatocyte lipid droplets from stressed mouse models |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4421934/ https://www.ncbi.nlm.nih.gov/pubmed/25977802 http://dx.doi.org/10.1038/sdata.2014.51 |
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