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Integrative network analysis reveals molecular mechanisms of blood pressure regulation
Genome‐wide association studies (GWAS) have identified numerous loci associated with blood pressure (BP). The molecular mechanisms underlying BP regulation, however, remain unclear. We investigated BP‐associated molecular mechanisms by integrating BP GWAS with whole blood mRNA expression profiles in...
Autores principales: | , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4422556/ https://www.ncbi.nlm.nih.gov/pubmed/25882670 http://dx.doi.org/10.15252/msb.20145399 |
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author | Huan, Tianxiao Meng, Qingying Saleh, Mohamed A Norlander, Allison E Joehanes, Roby Zhu, Jun Chen, Brian H Zhang, Bin Johnson, Andrew D Ying, Saixia Courchesne, Paul Raghavachari, Nalini Wang, Richard Liu, Poching O'Donnell, Christopher J Vasan, Ramachandran Munson, Peter J Madhur, Meena S Harrison, David G Yang, Xia Levy, Daniel |
author_facet | Huan, Tianxiao Meng, Qingying Saleh, Mohamed A Norlander, Allison E Joehanes, Roby Zhu, Jun Chen, Brian H Zhang, Bin Johnson, Andrew D Ying, Saixia Courchesne, Paul Raghavachari, Nalini Wang, Richard Liu, Poching O'Donnell, Christopher J Vasan, Ramachandran Munson, Peter J Madhur, Meena S Harrison, David G Yang, Xia Levy, Daniel |
author_sort | Huan, Tianxiao |
collection | PubMed |
description | Genome‐wide association studies (GWAS) have identified numerous loci associated with blood pressure (BP). The molecular mechanisms underlying BP regulation, however, remain unclear. We investigated BP‐associated molecular mechanisms by integrating BP GWAS with whole blood mRNA expression profiles in 3,679 individuals, using network approaches. BP transcriptomic signatures at the single‐gene and the coexpression network module levels were identified. Four coexpression modules were identified as potentially causal based on genetic inference because expression‐related SNPs for their corresponding genes demonstrated enrichment for BP GWAS signals. Genes from the four modules were further projected onto predefined molecular interaction networks, revealing key drivers. Gene subnetworks entailing molecular interactions between key drivers and BP‐related genes were uncovered. As proof‐of‐concept, we validated SH2B3, one of the top key drivers, using Sh2b3 (−/−) mice. We found that a significant number of genes predicted to be regulated by SH2B3 in gene networks are perturbed in Sh2b3 (−/−) mice, which demonstrate an exaggerated pressor response to angiotensin II infusion. Our findings may help to identify novel targets for the prevention or treatment of hypertension. |
format | Online Article Text |
id | pubmed-4422556 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-44225562015-05-12 Integrative network analysis reveals molecular mechanisms of blood pressure regulation Huan, Tianxiao Meng, Qingying Saleh, Mohamed A Norlander, Allison E Joehanes, Roby Zhu, Jun Chen, Brian H Zhang, Bin Johnson, Andrew D Ying, Saixia Courchesne, Paul Raghavachari, Nalini Wang, Richard Liu, Poching O'Donnell, Christopher J Vasan, Ramachandran Munson, Peter J Madhur, Meena S Harrison, David G Yang, Xia Levy, Daniel Mol Syst Biol Articles Genome‐wide association studies (GWAS) have identified numerous loci associated with blood pressure (BP). The molecular mechanisms underlying BP regulation, however, remain unclear. We investigated BP‐associated molecular mechanisms by integrating BP GWAS with whole blood mRNA expression profiles in 3,679 individuals, using network approaches. BP transcriptomic signatures at the single‐gene and the coexpression network module levels were identified. Four coexpression modules were identified as potentially causal based on genetic inference because expression‐related SNPs for their corresponding genes demonstrated enrichment for BP GWAS signals. Genes from the four modules were further projected onto predefined molecular interaction networks, revealing key drivers. Gene subnetworks entailing molecular interactions between key drivers and BP‐related genes were uncovered. As proof‐of‐concept, we validated SH2B3, one of the top key drivers, using Sh2b3 (−/−) mice. We found that a significant number of genes predicted to be regulated by SH2B3 in gene networks are perturbed in Sh2b3 (−/−) mice, which demonstrate an exaggerated pressor response to angiotensin II infusion. Our findings may help to identify novel targets for the prevention or treatment of hypertension. John Wiley and Sons Inc. 2015-04-16 /pmc/articles/PMC4422556/ /pubmed/25882670 http://dx.doi.org/10.15252/msb.20145399 Text en © 2015 The Authors. Published under the terms of the CC BY 4.0 license This is an open access article under the terms of the Creative Commons Attribution 4.0 (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Huan, Tianxiao Meng, Qingying Saleh, Mohamed A Norlander, Allison E Joehanes, Roby Zhu, Jun Chen, Brian H Zhang, Bin Johnson, Andrew D Ying, Saixia Courchesne, Paul Raghavachari, Nalini Wang, Richard Liu, Poching O'Donnell, Christopher J Vasan, Ramachandran Munson, Peter J Madhur, Meena S Harrison, David G Yang, Xia Levy, Daniel Integrative network analysis reveals molecular mechanisms of blood pressure regulation |
title | Integrative network analysis reveals molecular mechanisms of blood pressure regulation |
title_full | Integrative network analysis reveals molecular mechanisms of blood pressure regulation |
title_fullStr | Integrative network analysis reveals molecular mechanisms of blood pressure regulation |
title_full_unstemmed | Integrative network analysis reveals molecular mechanisms of blood pressure regulation |
title_short | Integrative network analysis reveals molecular mechanisms of blood pressure regulation |
title_sort | integrative network analysis reveals molecular mechanisms of blood pressure regulation |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4422556/ https://www.ncbi.nlm.nih.gov/pubmed/25882670 http://dx.doi.org/10.15252/msb.20145399 |
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