Cargando…
Replication of KCNJ11 (p.E23K) and ABCC8 (p.S1369A) Association in Russian Diabetes Mellitus 2 Type Cohort and Meta-Analysis
The genes ABCC8 and KCNJ11 have received intense focus in type 2 diabetes mellitus (T2DM) research over the past two decades. It has been hypothesized that the p.E23K (KCNJ11) mutation in the 11p15.1 region may play an important role in the development of T2DM. In 2009, Hamming et al. found that the...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4425644/ https://www.ncbi.nlm.nih.gov/pubmed/25955821 http://dx.doi.org/10.1371/journal.pone.0124662 |
_version_ | 1782370511361146880 |
---|---|
author | Sokolova, Ekaterina Alekseevna Bondar, Irina Arkadievna Shabelnikova, Olesya Yurievna Pyankova, Olga Vladimirovna Filipenko, Maxim Leonidovich |
author_facet | Sokolova, Ekaterina Alekseevna Bondar, Irina Arkadievna Shabelnikova, Olesya Yurievna Pyankova, Olga Vladimirovna Filipenko, Maxim Leonidovich |
author_sort | Sokolova, Ekaterina Alekseevna |
collection | PubMed |
description | The genes ABCC8 and KCNJ11 have received intense focus in type 2 diabetes mellitus (T2DM) research over the past two decades. It has been hypothesized that the p.E23K (KCNJ11) mutation in the 11p15.1 region may play an important role in the development of T2DM. In 2009, Hamming et al. found that the p.1369A (ABCC8) variant may be a causal factor in the disease; therefore, in this study we performed a meta-analysis to evaluate the association between these single nucleotide polymorphisms (SNPs), including our original data on the Siberian population (1384 T2DM and 414 controls). We found rs5219 and rs757110 were not associated with T2DM in this population, and that there was linkage disequilibrium in Siberians (D’=0.766, r(2)= 0.5633). In addition, the haplotype rs757110[T]-rs5219[C] (p.23K/p.S1369) was associated with T2DM (OR = 1.52, 95% CI: 1.04-2.24). We included 44 original studies published by June 2014 in a meta-analysis of the p.E23K association with T2DM. The total OR was 1.14 (95% CI: 1.11-1.17) for p.E23K for a total sample size of 137,298. For p.S1369A, a meta-analysis was conducted on a total of 10 studies with a total sample size of 14,136 and pooled OR of 1.14 [95% CI (1.08-1.19); p = 2 x 10(-6)]. Our calculations identified causal genetic variation within the ABCC8/KCNJ11 region for T2DM with an OR of approximately 1.15 in Caucasians and Asians. Moreover, the OR value was not dependent on the frequency of p.E23K or p.S1369A in the populations. |
format | Online Article Text |
id | pubmed-4425644 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-44256442015-05-21 Replication of KCNJ11 (p.E23K) and ABCC8 (p.S1369A) Association in Russian Diabetes Mellitus 2 Type Cohort and Meta-Analysis Sokolova, Ekaterina Alekseevna Bondar, Irina Arkadievna Shabelnikova, Olesya Yurievna Pyankova, Olga Vladimirovna Filipenko, Maxim Leonidovich PLoS One Research Article The genes ABCC8 and KCNJ11 have received intense focus in type 2 diabetes mellitus (T2DM) research over the past two decades. It has been hypothesized that the p.E23K (KCNJ11) mutation in the 11p15.1 region may play an important role in the development of T2DM. In 2009, Hamming et al. found that the p.1369A (ABCC8) variant may be a causal factor in the disease; therefore, in this study we performed a meta-analysis to evaluate the association between these single nucleotide polymorphisms (SNPs), including our original data on the Siberian population (1384 T2DM and 414 controls). We found rs5219 and rs757110 were not associated with T2DM in this population, and that there was linkage disequilibrium in Siberians (D’=0.766, r(2)= 0.5633). In addition, the haplotype rs757110[T]-rs5219[C] (p.23K/p.S1369) was associated with T2DM (OR = 1.52, 95% CI: 1.04-2.24). We included 44 original studies published by June 2014 in a meta-analysis of the p.E23K association with T2DM. The total OR was 1.14 (95% CI: 1.11-1.17) for p.E23K for a total sample size of 137,298. For p.S1369A, a meta-analysis was conducted on a total of 10 studies with a total sample size of 14,136 and pooled OR of 1.14 [95% CI (1.08-1.19); p = 2 x 10(-6)]. Our calculations identified causal genetic variation within the ABCC8/KCNJ11 region for T2DM with an OR of approximately 1.15 in Caucasians and Asians. Moreover, the OR value was not dependent on the frequency of p.E23K or p.S1369A in the populations. Public Library of Science 2015-05-08 /pmc/articles/PMC4425644/ /pubmed/25955821 http://dx.doi.org/10.1371/journal.pone.0124662 Text en © 2015 Sokolova et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Sokolova, Ekaterina Alekseevna Bondar, Irina Arkadievna Shabelnikova, Olesya Yurievna Pyankova, Olga Vladimirovna Filipenko, Maxim Leonidovich Replication of KCNJ11 (p.E23K) and ABCC8 (p.S1369A) Association in Russian Diabetes Mellitus 2 Type Cohort and Meta-Analysis |
title | Replication of KCNJ11 (p.E23K) and ABCC8 (p.S1369A) Association in Russian Diabetes Mellitus 2 Type Cohort and Meta-Analysis |
title_full | Replication of KCNJ11 (p.E23K) and ABCC8 (p.S1369A) Association in Russian Diabetes Mellitus 2 Type Cohort and Meta-Analysis |
title_fullStr | Replication of KCNJ11 (p.E23K) and ABCC8 (p.S1369A) Association in Russian Diabetes Mellitus 2 Type Cohort and Meta-Analysis |
title_full_unstemmed | Replication of KCNJ11 (p.E23K) and ABCC8 (p.S1369A) Association in Russian Diabetes Mellitus 2 Type Cohort and Meta-Analysis |
title_short | Replication of KCNJ11 (p.E23K) and ABCC8 (p.S1369A) Association in Russian Diabetes Mellitus 2 Type Cohort and Meta-Analysis |
title_sort | replication of kcnj11 (p.e23k) and abcc8 (p.s1369a) association in russian diabetes mellitus 2 type cohort and meta-analysis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4425644/ https://www.ncbi.nlm.nih.gov/pubmed/25955821 http://dx.doi.org/10.1371/journal.pone.0124662 |
work_keys_str_mv | AT sokolovaekaterinaalekseevna replicationofkcnj11pe23kandabcc8ps1369aassociationinrussiandiabetesmellitus2typecohortandmetaanalysis AT bondaririnaarkadievna replicationofkcnj11pe23kandabcc8ps1369aassociationinrussiandiabetesmellitus2typecohortandmetaanalysis AT shabelnikovaolesyayurievna replicationofkcnj11pe23kandabcc8ps1369aassociationinrussiandiabetesmellitus2typecohortandmetaanalysis AT pyankovaolgavladimirovna replicationofkcnj11pe23kandabcc8ps1369aassociationinrussiandiabetesmellitus2typecohortandmetaanalysis AT filipenkomaximleonidovich replicationofkcnj11pe23kandabcc8ps1369aassociationinrussiandiabetesmellitus2typecohortandmetaanalysis |