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Tissue spray ionization mass spectrometry for rapid recognition of human lung squamous cell carcinoma
Tissue spray ionization mass spectrometry (TSI-MS) directly on small tissue samples has been shown to provide highly specific molecular information. In this study, we apply this method to the analysis of 38 pairs of human lung squamous cell carcinoma tissue (cancer) and adjacent normal lung tissue (...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4426755/ https://www.ncbi.nlm.nih.gov/pubmed/25961911 http://dx.doi.org/10.1038/srep10077 |
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author | Wei, Yiping Chen, Liru Zhou, Wei Chingin, Konstantin Ouyang, Yongzhong Zhu, Tenggao Wen, Hua Ding, Jianhua Xu, Jianjun Chen, Huanwen |
author_facet | Wei, Yiping Chen, Liru Zhou, Wei Chingin, Konstantin Ouyang, Yongzhong Zhu, Tenggao Wen, Hua Ding, Jianhua Xu, Jianjun Chen, Huanwen |
author_sort | Wei, Yiping |
collection | PubMed |
description | Tissue spray ionization mass spectrometry (TSI-MS) directly on small tissue samples has been shown to provide highly specific molecular information. In this study, we apply this method to the analysis of 38 pairs of human lung squamous cell carcinoma tissue (cancer) and adjacent normal lung tissue (normal). The main components of pulmonary surfactants, dipalmitoyl phosphatidylcholine (DPPC, m/z 757.47), phosphatidylcholine (POPC, m/z 782.52), oleoyl phosphatidylcholine (DOPC, m/z 808.49), and arachidonic acid stearoyl phosphatidylcholine (SAPC, m/z 832.43), were identified using high-resolution tandem mass spectrometry. Monte Carlo sampling partial least squares linear discriminant analysis (PLS-LDA) was used to distinguish full-mass-range mass spectra of cancer samples from the mass spectra of normal tissues. With 5 principal components and 30 – 40 Monte Carlo samplings, the accuracy of cancer identification in matched tissue samples reached 94.42%. Classification of a tissue sample required less than 1 min, which is much faster than the analysis of frozen sections. The rapid, in situ diagnosis with minimal sample consumption provided by TSI-MS is advantageous for surgeons. TSI-MS allows them to make more informed decisions during surgery. |
format | Online Article Text |
id | pubmed-4426755 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-44267552015-05-21 Tissue spray ionization mass spectrometry for rapid recognition of human lung squamous cell carcinoma Wei, Yiping Chen, Liru Zhou, Wei Chingin, Konstantin Ouyang, Yongzhong Zhu, Tenggao Wen, Hua Ding, Jianhua Xu, Jianjun Chen, Huanwen Sci Rep Article Tissue spray ionization mass spectrometry (TSI-MS) directly on small tissue samples has been shown to provide highly specific molecular information. In this study, we apply this method to the analysis of 38 pairs of human lung squamous cell carcinoma tissue (cancer) and adjacent normal lung tissue (normal). The main components of pulmonary surfactants, dipalmitoyl phosphatidylcholine (DPPC, m/z 757.47), phosphatidylcholine (POPC, m/z 782.52), oleoyl phosphatidylcholine (DOPC, m/z 808.49), and arachidonic acid stearoyl phosphatidylcholine (SAPC, m/z 832.43), were identified using high-resolution tandem mass spectrometry. Monte Carlo sampling partial least squares linear discriminant analysis (PLS-LDA) was used to distinguish full-mass-range mass spectra of cancer samples from the mass spectra of normal tissues. With 5 principal components and 30 – 40 Monte Carlo samplings, the accuracy of cancer identification in matched tissue samples reached 94.42%. Classification of a tissue sample required less than 1 min, which is much faster than the analysis of frozen sections. The rapid, in situ diagnosis with minimal sample consumption provided by TSI-MS is advantageous for surgeons. TSI-MS allows them to make more informed decisions during surgery. Nature Publishing Group 2015-05-11 /pmc/articles/PMC4426755/ /pubmed/25961911 http://dx.doi.org/10.1038/srep10077 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Wei, Yiping Chen, Liru Zhou, Wei Chingin, Konstantin Ouyang, Yongzhong Zhu, Tenggao Wen, Hua Ding, Jianhua Xu, Jianjun Chen, Huanwen Tissue spray ionization mass spectrometry for rapid recognition of human lung squamous cell carcinoma |
title | Tissue spray ionization mass spectrometry for rapid recognition of human lung squamous cell carcinoma |
title_full | Tissue spray ionization mass spectrometry for rapid recognition of human lung squamous cell carcinoma |
title_fullStr | Tissue spray ionization mass spectrometry for rapid recognition of human lung squamous cell carcinoma |
title_full_unstemmed | Tissue spray ionization mass spectrometry for rapid recognition of human lung squamous cell carcinoma |
title_short | Tissue spray ionization mass spectrometry for rapid recognition of human lung squamous cell carcinoma |
title_sort | tissue spray ionization mass spectrometry for rapid recognition of human lung squamous cell carcinoma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4426755/ https://www.ncbi.nlm.nih.gov/pubmed/25961911 http://dx.doi.org/10.1038/srep10077 |
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