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Genetic Testing of Korean Familial Hypercholesterolemia Using Whole-Exome Sequencing

Familial hypercholesterolemia (FH) is a genetic disorder with an increased risk of early-onset coronary artery disease. Although some clinically diagnosed FH cases are caused by mutations in LDLR, APOB, or PCSK9, mutation detection rates and profiles can vary across ethnic groups. In this study, we...

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Autores principales: Han, Soo Min, Hwang, Byungjin, Park, Tae-gun, Kim, Do-Il, Rhee, Moo-Yong, Lee, Byoung-Kwon, Ahn, Young Keun, Cho, Byung Ryul, Woo, Jeongtaek, Hur, Seung-Ho, Jeong, Jin-Ok, Park, Sungha, Jang, Yangsoo, Lee, Min Goo, Bang, Duhee, Lee, Ji Hyun, Lee, Sang-Hak
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4427254/
https://www.ncbi.nlm.nih.gov/pubmed/25962062
http://dx.doi.org/10.1371/journal.pone.0126706
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author Han, Soo Min
Hwang, Byungjin
Park, Tae-gun
Kim, Do-Il
Rhee, Moo-Yong
Lee, Byoung-Kwon
Ahn, Young Keun
Cho, Byung Ryul
Woo, Jeongtaek
Hur, Seung-Ho
Jeong, Jin-Ok
Park, Sungha
Jang, Yangsoo
Lee, Min Goo
Bang, Duhee
Lee, Ji Hyun
Lee, Sang-Hak
author_facet Han, Soo Min
Hwang, Byungjin
Park, Tae-gun
Kim, Do-Il
Rhee, Moo-Yong
Lee, Byoung-Kwon
Ahn, Young Keun
Cho, Byung Ryul
Woo, Jeongtaek
Hur, Seung-Ho
Jeong, Jin-Ok
Park, Sungha
Jang, Yangsoo
Lee, Min Goo
Bang, Duhee
Lee, Ji Hyun
Lee, Sang-Hak
author_sort Han, Soo Min
collection PubMed
description Familial hypercholesterolemia (FH) is a genetic disorder with an increased risk of early-onset coronary artery disease. Although some clinically diagnosed FH cases are caused by mutations in LDLR, APOB, or PCSK9, mutation detection rates and profiles can vary across ethnic groups. In this study, we aimed to provide insight into the spectrum of FH-causing mutations in Koreans. Among 136 patients referred for FH, 69 who met Simon Broome criteria with definite family history were enrolled. By whole-exome sequencing (WES) analysis, we confirmed that the 3 known FH-related genes accounted for genetic causes in 23 patients (33.3%). A substantial portion of the mutations (19 of 23 patients, 82.6%) resulted from 17 mutations and 2 copy number deletions in LDLR gene. Two mutations each in the APOB and PCSK9 genes were verified. Of these anomalies, two frameshift deletions in LDLR and one mutation in PCSK9 were identified as novel causative mutations. In particular, one novel mutation and copy number deletion were validated by co-segregation in their relatives. This study confirmed the utility of genetic diagnosis of FH through WES.
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spelling pubmed-44272542015-05-21 Genetic Testing of Korean Familial Hypercholesterolemia Using Whole-Exome Sequencing Han, Soo Min Hwang, Byungjin Park, Tae-gun Kim, Do-Il Rhee, Moo-Yong Lee, Byoung-Kwon Ahn, Young Keun Cho, Byung Ryul Woo, Jeongtaek Hur, Seung-Ho Jeong, Jin-Ok Park, Sungha Jang, Yangsoo Lee, Min Goo Bang, Duhee Lee, Ji Hyun Lee, Sang-Hak PLoS One Research Article Familial hypercholesterolemia (FH) is a genetic disorder with an increased risk of early-onset coronary artery disease. Although some clinically diagnosed FH cases are caused by mutations in LDLR, APOB, or PCSK9, mutation detection rates and profiles can vary across ethnic groups. In this study, we aimed to provide insight into the spectrum of FH-causing mutations in Koreans. Among 136 patients referred for FH, 69 who met Simon Broome criteria with definite family history were enrolled. By whole-exome sequencing (WES) analysis, we confirmed that the 3 known FH-related genes accounted for genetic causes in 23 patients (33.3%). A substantial portion of the mutations (19 of 23 patients, 82.6%) resulted from 17 mutations and 2 copy number deletions in LDLR gene. Two mutations each in the APOB and PCSK9 genes were verified. Of these anomalies, two frameshift deletions in LDLR and one mutation in PCSK9 were identified as novel causative mutations. In particular, one novel mutation and copy number deletion were validated by co-segregation in their relatives. This study confirmed the utility of genetic diagnosis of FH through WES. Public Library of Science 2015-05-11 /pmc/articles/PMC4427254/ /pubmed/25962062 http://dx.doi.org/10.1371/journal.pone.0126706 Text en © 2015 Han et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Han, Soo Min
Hwang, Byungjin
Park, Tae-gun
Kim, Do-Il
Rhee, Moo-Yong
Lee, Byoung-Kwon
Ahn, Young Keun
Cho, Byung Ryul
Woo, Jeongtaek
Hur, Seung-Ho
Jeong, Jin-Ok
Park, Sungha
Jang, Yangsoo
Lee, Min Goo
Bang, Duhee
Lee, Ji Hyun
Lee, Sang-Hak
Genetic Testing of Korean Familial Hypercholesterolemia Using Whole-Exome Sequencing
title Genetic Testing of Korean Familial Hypercholesterolemia Using Whole-Exome Sequencing
title_full Genetic Testing of Korean Familial Hypercholesterolemia Using Whole-Exome Sequencing
title_fullStr Genetic Testing of Korean Familial Hypercholesterolemia Using Whole-Exome Sequencing
title_full_unstemmed Genetic Testing of Korean Familial Hypercholesterolemia Using Whole-Exome Sequencing
title_short Genetic Testing of Korean Familial Hypercholesterolemia Using Whole-Exome Sequencing
title_sort genetic testing of korean familial hypercholesterolemia using whole-exome sequencing
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4427254/
https://www.ncbi.nlm.nih.gov/pubmed/25962062
http://dx.doi.org/10.1371/journal.pone.0126706
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