Cargando…

Biogeography and Genetic Structure in Populations of a Widespread Lichen (Parmelina tiliacea, Parmeliaceae, Ascomycota)

The genetic diversity and population structure of the foliose lichenized fungus Parmelina tiliacea has been analyzed through its geographical range, including samples from Macaronesia (Canary Islands), the Mediterranean, and Eurosiberia. DNA sequences from the nuclear ribosomal internal transcribed...

Descripción completa

Detalles Bibliográficos
Autores principales: Núñez-Zapata, Jano, Cubas, Paloma, Hawksworth, David L., Crespo, Ana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4427293/
https://www.ncbi.nlm.nih.gov/pubmed/25961726
http://dx.doi.org/10.1371/journal.pone.0126981
_version_ 1782370706770624512
author Núñez-Zapata, Jano
Cubas, Paloma
Hawksworth, David L.
Crespo, Ana
author_facet Núñez-Zapata, Jano
Cubas, Paloma
Hawksworth, David L.
Crespo, Ana
author_sort Núñez-Zapata, Jano
collection PubMed
description The genetic diversity and population structure of the foliose lichenized fungus Parmelina tiliacea has been analyzed through its geographical range, including samples from Macaronesia (Canary Islands), the Mediterranean, and Eurosiberia. DNA sequences from the nuclear ribosomal internal transcribed spacer, the mitochondrial large subunit ribosomal RNA gene, and the translation elongation factor 1-α were used as molecular markers. The haplotypes of the three markers and the molecular variance analyses of multilocus haplotypes showed the highest diversity in the Canary Islands, while restricted haplotypes occurred at high frequencies in Mediterranean coastal samples. The multilocus haplotypes formed three unevenly distributed clusters (clusters 1-3). In the Canary Islands all the haplotypes were present in a similar proportion, while the coastal Mediterranean sites had almost exclusively haplotypes of cluster 3; cluster 2 predominated in inland Mediterranean sites; and cluster 1 was more abundant in central and northern Europe (Eurosiberian area). The distribution of clusters is partially explained by climatic factors, and its interaction with local spatial structure, but much of the variation remains unexplained. The high frequency of individuals in the Canary Islands with haplotypes shared with other areas suggests that could be a refugium of genetic diversity, and the high frequency of individuals of the Mediterranean coastal sites with restricted haplotypes indicates that gene flow to contiguous areas may be restricted. This is significant for the selection of areas for conservation purposes, as those with most genetic variation may reflect historical factors and biological properties of the species.
format Online
Article
Text
id pubmed-4427293
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-44272932015-05-21 Biogeography and Genetic Structure in Populations of a Widespread Lichen (Parmelina tiliacea, Parmeliaceae, Ascomycota) Núñez-Zapata, Jano Cubas, Paloma Hawksworth, David L. Crespo, Ana PLoS One Research Article The genetic diversity and population structure of the foliose lichenized fungus Parmelina tiliacea has been analyzed through its geographical range, including samples from Macaronesia (Canary Islands), the Mediterranean, and Eurosiberia. DNA sequences from the nuclear ribosomal internal transcribed spacer, the mitochondrial large subunit ribosomal RNA gene, and the translation elongation factor 1-α were used as molecular markers. The haplotypes of the three markers and the molecular variance analyses of multilocus haplotypes showed the highest diversity in the Canary Islands, while restricted haplotypes occurred at high frequencies in Mediterranean coastal samples. The multilocus haplotypes formed three unevenly distributed clusters (clusters 1-3). In the Canary Islands all the haplotypes were present in a similar proportion, while the coastal Mediterranean sites had almost exclusively haplotypes of cluster 3; cluster 2 predominated in inland Mediterranean sites; and cluster 1 was more abundant in central and northern Europe (Eurosiberian area). The distribution of clusters is partially explained by climatic factors, and its interaction with local spatial structure, but much of the variation remains unexplained. The high frequency of individuals in the Canary Islands with haplotypes shared with other areas suggests that could be a refugium of genetic diversity, and the high frequency of individuals of the Mediterranean coastal sites with restricted haplotypes indicates that gene flow to contiguous areas may be restricted. This is significant for the selection of areas for conservation purposes, as those with most genetic variation may reflect historical factors and biological properties of the species. Public Library of Science 2015-05-11 /pmc/articles/PMC4427293/ /pubmed/25961726 http://dx.doi.org/10.1371/journal.pone.0126981 Text en © 2015 Núñez-Zapata et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Núñez-Zapata, Jano
Cubas, Paloma
Hawksworth, David L.
Crespo, Ana
Biogeography and Genetic Structure in Populations of a Widespread Lichen (Parmelina tiliacea, Parmeliaceae, Ascomycota)
title Biogeography and Genetic Structure in Populations of a Widespread Lichen (Parmelina tiliacea, Parmeliaceae, Ascomycota)
title_full Biogeography and Genetic Structure in Populations of a Widespread Lichen (Parmelina tiliacea, Parmeliaceae, Ascomycota)
title_fullStr Biogeography and Genetic Structure in Populations of a Widespread Lichen (Parmelina tiliacea, Parmeliaceae, Ascomycota)
title_full_unstemmed Biogeography and Genetic Structure in Populations of a Widespread Lichen (Parmelina tiliacea, Parmeliaceae, Ascomycota)
title_short Biogeography and Genetic Structure in Populations of a Widespread Lichen (Parmelina tiliacea, Parmeliaceae, Ascomycota)
title_sort biogeography and genetic structure in populations of a widespread lichen (parmelina tiliacea, parmeliaceae, ascomycota)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4427293/
https://www.ncbi.nlm.nih.gov/pubmed/25961726
http://dx.doi.org/10.1371/journal.pone.0126981
work_keys_str_mv AT nunezzapatajano biogeographyandgeneticstructureinpopulationsofawidespreadlichenparmelinatiliaceaparmeliaceaeascomycota
AT cubaspaloma biogeographyandgeneticstructureinpopulationsofawidespreadlichenparmelinatiliaceaparmeliaceaeascomycota
AT hawksworthdavidl biogeographyandgeneticstructureinpopulationsofawidespreadlichenparmelinatiliaceaparmeliaceaeascomycota
AT crespoana biogeographyandgeneticstructureinpopulationsofawidespreadlichenparmelinatiliaceaparmeliaceaeascomycota