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BrainSignals Revisited: Simplifying a Computational Model of Cerebral Physiology

Multimodal monitoring of brain state is important both for the investigation of healthy cerebral physiology and to inform clinical decision making in conditions of injury and disease. Near-infrared spectroscopy is an instrument modality that allows non-invasive measurement of several physiological v...

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Autores principales: Caldwell, Matthew, Hapuarachchi, Tharindi, Highton, David, Elwell, Clare, Smith, Martin, Tachtsidis, Ilias
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4427507/
https://www.ncbi.nlm.nih.gov/pubmed/25961297
http://dx.doi.org/10.1371/journal.pone.0126695
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author Caldwell, Matthew
Hapuarachchi, Tharindi
Highton, David
Elwell, Clare
Smith, Martin
Tachtsidis, Ilias
author_facet Caldwell, Matthew
Hapuarachchi, Tharindi
Highton, David
Elwell, Clare
Smith, Martin
Tachtsidis, Ilias
author_sort Caldwell, Matthew
collection PubMed
description Multimodal monitoring of brain state is important both for the investigation of healthy cerebral physiology and to inform clinical decision making in conditions of injury and disease. Near-infrared spectroscopy is an instrument modality that allows non-invasive measurement of several physiological variables of clinical interest, notably haemoglobin oxygenation and the redox state of the metabolic enzyme cytochrome c oxidase. Interpreting such measurements requires the integration of multiple signals from different sources to try to understand the physiological states giving rise to them. We have previously published several computational models to assist with such interpretation. Like many models in the realm of Systems Biology, these are complex and dependent on many parameters that can be difficult or impossible to measure precisely. Taking one such model, BrainSignals, as a starting point, we have developed several variant models in which specific regions of complexity are substituted with much simpler linear approximations. We demonstrate that model behaviour can be maintained whilst achieving a significant reduction in complexity, provided that the linearity assumptions hold. The simplified models have been tested for applicability with simulated data and experimental data from healthy adults undergoing a hypercapnia challenge, but relevance to different physiological and pathophysiological conditions will require specific testing. In conditions where the simplified models are applicable, their greater efficiency has potential to allow their use at the bedside to help interpret clinical data in near real-time.
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spelling pubmed-44275072015-05-21 BrainSignals Revisited: Simplifying a Computational Model of Cerebral Physiology Caldwell, Matthew Hapuarachchi, Tharindi Highton, David Elwell, Clare Smith, Martin Tachtsidis, Ilias PLoS One Research Article Multimodal monitoring of brain state is important both for the investigation of healthy cerebral physiology and to inform clinical decision making in conditions of injury and disease. Near-infrared spectroscopy is an instrument modality that allows non-invasive measurement of several physiological variables of clinical interest, notably haemoglobin oxygenation and the redox state of the metabolic enzyme cytochrome c oxidase. Interpreting such measurements requires the integration of multiple signals from different sources to try to understand the physiological states giving rise to them. We have previously published several computational models to assist with such interpretation. Like many models in the realm of Systems Biology, these are complex and dependent on many parameters that can be difficult or impossible to measure precisely. Taking one such model, BrainSignals, as a starting point, we have developed several variant models in which specific regions of complexity are substituted with much simpler linear approximations. We demonstrate that model behaviour can be maintained whilst achieving a significant reduction in complexity, provided that the linearity assumptions hold. The simplified models have been tested for applicability with simulated data and experimental data from healthy adults undergoing a hypercapnia challenge, but relevance to different physiological and pathophysiological conditions will require specific testing. In conditions where the simplified models are applicable, their greater efficiency has potential to allow their use at the bedside to help interpret clinical data in near real-time. Public Library of Science 2015-05-11 /pmc/articles/PMC4427507/ /pubmed/25961297 http://dx.doi.org/10.1371/journal.pone.0126695 Text en © 2015 Caldwell et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Caldwell, Matthew
Hapuarachchi, Tharindi
Highton, David
Elwell, Clare
Smith, Martin
Tachtsidis, Ilias
BrainSignals Revisited: Simplifying a Computational Model of Cerebral Physiology
title BrainSignals Revisited: Simplifying a Computational Model of Cerebral Physiology
title_full BrainSignals Revisited: Simplifying a Computational Model of Cerebral Physiology
title_fullStr BrainSignals Revisited: Simplifying a Computational Model of Cerebral Physiology
title_full_unstemmed BrainSignals Revisited: Simplifying a Computational Model of Cerebral Physiology
title_short BrainSignals Revisited: Simplifying a Computational Model of Cerebral Physiology
title_sort brainsignals revisited: simplifying a computational model of cerebral physiology
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4427507/
https://www.ncbi.nlm.nih.gov/pubmed/25961297
http://dx.doi.org/10.1371/journal.pone.0126695
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