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Genome-wide association study of perioperative myocardial infarction after coronary artery bypass surgery
OBJECTIVES: Identification of patient subpopulations susceptible to develop myocardial infarction (MI) or, conversely, those displaying either intrinsic cardioprotective phenotypes or highly responsive to protective interventions remain high-priority knowledge gaps. We sought to identify novel commo...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BMJ Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4431169/ https://www.ncbi.nlm.nih.gov/pubmed/25948407 http://dx.doi.org/10.1136/bmjopen-2014-006920 |
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author | Kertai, Miklos D Li, Yi-Ju Li, Yen-Wei Ji, Yunqi Alexander, John Newman, Mark F Smith, Peter K Joseph, Diane Mathew, Joseph P Podgoreanu, Mihai V |
author_facet | Kertai, Miklos D Li, Yi-Ju Li, Yen-Wei Ji, Yunqi Alexander, John Newman, Mark F Smith, Peter K Joseph, Diane Mathew, Joseph P Podgoreanu, Mihai V |
author_sort | Kertai, Miklos D |
collection | PubMed |
description | OBJECTIVES: Identification of patient subpopulations susceptible to develop myocardial infarction (MI) or, conversely, those displaying either intrinsic cardioprotective phenotypes or highly responsive to protective interventions remain high-priority knowledge gaps. We sought to identify novel common genetic variants associated with perioperative MI in patients undergoing coronary artery bypass grafting using genome-wide association methodology. SETTING: 107 secondary and tertiary cardiac surgery centres across the USA. PARTICIPANTS: We conducted a stage I genome-wide association study (GWAS) in 1433 ethnically diverse patients of both genders (112 cases/1321 controls) from the Genetics of Myocardial Adverse Outcomes and Graft Failure (GeneMAGIC) study, and a stage II analysis in an expanded population of 2055 patients (225 cases/1830 controls) combined from the GeneMAGIC and Duke Perioperative Genetics and Safety Outcomes (PEGASUS) studies. Patients undergoing primary non-emergent coronary bypass grafting were included. PRIMARY AND SECONDARY OUTCOME MEASURES: The primary outcome variable was perioperative MI, defined as creatine kinase MB isoenzyme (CK-MB) values ≥10× upper limit of normal during the first postoperative day, and not attributable to preoperative MI. Secondary outcomes included postoperative CK-MB as a quantitative trait, or a dichotomised phenotype based on extreme quartiles of the CK-MB distribution. RESULTS: Following quality control and adjustment for clinical covariates, we identified 521 single nucleotide polymorphisms in the stage I GWAS analysis. Among these, 8 common variants in 3 genes or intergenic regions met p<10(−5) in stage II. A secondary analysis using CK-MB as a quantitative trait (minimum p=1.26×10(−3) for rs609418), or a dichotomised phenotype based on extreme CK-MB values (minimum p=7.72×10(−6) for rs4834703) supported these findings. Pathway analysis revealed that genes harbouring top-scoring variants cluster in pathways of biological relevance to extracellular matrix remodelling, endoplasmic reticulum-to-Golgi transport and inflammation. CONCLUSIONS: Using a two-stage GWAS and pathway analysis, we identified and prioritised several potential susceptibility loci for perioperative MI. |
format | Online Article Text |
id | pubmed-4431169 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BMJ Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-44311692015-05-20 Genome-wide association study of perioperative myocardial infarction after coronary artery bypass surgery Kertai, Miklos D Li, Yi-Ju Li, Yen-Wei Ji, Yunqi Alexander, John Newman, Mark F Smith, Peter K Joseph, Diane Mathew, Joseph P Podgoreanu, Mihai V BMJ Open Genetics and Genomics OBJECTIVES: Identification of patient subpopulations susceptible to develop myocardial infarction (MI) or, conversely, those displaying either intrinsic cardioprotective phenotypes or highly responsive to protective interventions remain high-priority knowledge gaps. We sought to identify novel common genetic variants associated with perioperative MI in patients undergoing coronary artery bypass grafting using genome-wide association methodology. SETTING: 107 secondary and tertiary cardiac surgery centres across the USA. PARTICIPANTS: We conducted a stage I genome-wide association study (GWAS) in 1433 ethnically diverse patients of both genders (112 cases/1321 controls) from the Genetics of Myocardial Adverse Outcomes and Graft Failure (GeneMAGIC) study, and a stage II analysis in an expanded population of 2055 patients (225 cases/1830 controls) combined from the GeneMAGIC and Duke Perioperative Genetics and Safety Outcomes (PEGASUS) studies. Patients undergoing primary non-emergent coronary bypass grafting were included. PRIMARY AND SECONDARY OUTCOME MEASURES: The primary outcome variable was perioperative MI, defined as creatine kinase MB isoenzyme (CK-MB) values ≥10× upper limit of normal during the first postoperative day, and not attributable to preoperative MI. Secondary outcomes included postoperative CK-MB as a quantitative trait, or a dichotomised phenotype based on extreme quartiles of the CK-MB distribution. RESULTS: Following quality control and adjustment for clinical covariates, we identified 521 single nucleotide polymorphisms in the stage I GWAS analysis. Among these, 8 common variants in 3 genes or intergenic regions met p<10(−5) in stage II. A secondary analysis using CK-MB as a quantitative trait (minimum p=1.26×10(−3) for rs609418), or a dichotomised phenotype based on extreme CK-MB values (minimum p=7.72×10(−6) for rs4834703) supported these findings. Pathway analysis revealed that genes harbouring top-scoring variants cluster in pathways of biological relevance to extracellular matrix remodelling, endoplasmic reticulum-to-Golgi transport and inflammation. CONCLUSIONS: Using a two-stage GWAS and pathway analysis, we identified and prioritised several potential susceptibility loci for perioperative MI. BMJ Publishing Group 2015-05-06 /pmc/articles/PMC4431169/ /pubmed/25948407 http://dx.doi.org/10.1136/bmjopen-2014-006920 Text en Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions This is an Open Access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/ |
spellingShingle | Genetics and Genomics Kertai, Miklos D Li, Yi-Ju Li, Yen-Wei Ji, Yunqi Alexander, John Newman, Mark F Smith, Peter K Joseph, Diane Mathew, Joseph P Podgoreanu, Mihai V Genome-wide association study of perioperative myocardial infarction after coronary artery bypass surgery |
title | Genome-wide association study of perioperative myocardial infarction after coronary artery bypass surgery |
title_full | Genome-wide association study of perioperative myocardial infarction after coronary artery bypass surgery |
title_fullStr | Genome-wide association study of perioperative myocardial infarction after coronary artery bypass surgery |
title_full_unstemmed | Genome-wide association study of perioperative myocardial infarction after coronary artery bypass surgery |
title_short | Genome-wide association study of perioperative myocardial infarction after coronary artery bypass surgery |
title_sort | genome-wide association study of perioperative myocardial infarction after coronary artery bypass surgery |
topic | Genetics and Genomics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4431169/ https://www.ncbi.nlm.nih.gov/pubmed/25948407 http://dx.doi.org/10.1136/bmjopen-2014-006920 |
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