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Synthetic Biology Toolbox for Controlling Gene Expression in the Cyanobacterium Synechococcus sp. strain PCC 7002
[Image: see text] The application of synthetic biology requires characterized tools to precisely control gene expression. This toolbox of genetic parts previously did not exist for the industrially promising cyanobacterium, Synechococcus sp. strain PCC 7002. To address this gap, two orthogonal const...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2014
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4431953/ https://www.ncbi.nlm.nih.gov/pubmed/25216157 http://dx.doi.org/10.1021/sb500260k |
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author | Markley, Andrew L. Begemann, Matthew B. Clarke, Ryan E. Gordon, Gina C. Pfleger, Brian F. |
author_facet | Markley, Andrew L. Begemann, Matthew B. Clarke, Ryan E. Gordon, Gina C. Pfleger, Brian F. |
author_sort | Markley, Andrew L. |
collection | PubMed |
description | [Image: see text] The application of synthetic biology requires characterized tools to precisely control gene expression. This toolbox of genetic parts previously did not exist for the industrially promising cyanobacterium, Synechococcus sp. strain PCC 7002. To address this gap, two orthogonal constitutive promoter libraries, one based on a cyanobacterial promoter and the other ported from Escherichia coli, were built and tested in PCC 7002. The libraries demonstrated 3 and 2.5 log dynamic ranges, respectively, but correlated poorly with E. coli expression levels. These promoter libraries were then combined to create and optimize a series of IPTG inducible cassettes. The resultant induction system had a 48-fold dynamic range and was shown to out-perform P(trc) constructs. Finally, a RBS library was designed and tested in PCC 7002. The presented synthetic biology toolbox will enable accelerated engineering of PCC 7002. |
format | Online Article Text |
id | pubmed-4431953 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-44319532015-09-12 Synthetic Biology Toolbox for Controlling Gene Expression in the Cyanobacterium Synechococcus sp. strain PCC 7002 Markley, Andrew L. Begemann, Matthew B. Clarke, Ryan E. Gordon, Gina C. Pfleger, Brian F. ACS Synth Biol [Image: see text] The application of synthetic biology requires characterized tools to precisely control gene expression. This toolbox of genetic parts previously did not exist for the industrially promising cyanobacterium, Synechococcus sp. strain PCC 7002. To address this gap, two orthogonal constitutive promoter libraries, one based on a cyanobacterial promoter and the other ported from Escherichia coli, were built and tested in PCC 7002. The libraries demonstrated 3 and 2.5 log dynamic ranges, respectively, but correlated poorly with E. coli expression levels. These promoter libraries were then combined to create and optimize a series of IPTG inducible cassettes. The resultant induction system had a 48-fold dynamic range and was shown to out-perform P(trc) constructs. Finally, a RBS library was designed and tested in PCC 7002. The presented synthetic biology toolbox will enable accelerated engineering of PCC 7002. American Chemical Society 2014-09-12 2015-05-15 /pmc/articles/PMC4431953/ /pubmed/25216157 http://dx.doi.org/10.1021/sb500260k Text en Copyright © 2014 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Markley, Andrew L. Begemann, Matthew B. Clarke, Ryan E. Gordon, Gina C. Pfleger, Brian F. Synthetic Biology Toolbox for Controlling Gene Expression in the Cyanobacterium Synechococcus sp. strain PCC 7002 |
title | Synthetic Biology Toolbox for Controlling Gene Expression
in the Cyanobacterium Synechococcus sp. strain PCC
7002 |
title_full | Synthetic Biology Toolbox for Controlling Gene Expression
in the Cyanobacterium Synechococcus sp. strain PCC
7002 |
title_fullStr | Synthetic Biology Toolbox for Controlling Gene Expression
in the Cyanobacterium Synechococcus sp. strain PCC
7002 |
title_full_unstemmed | Synthetic Biology Toolbox for Controlling Gene Expression
in the Cyanobacterium Synechococcus sp. strain PCC
7002 |
title_short | Synthetic Biology Toolbox for Controlling Gene Expression
in the Cyanobacterium Synechococcus sp. strain PCC
7002 |
title_sort | synthetic biology toolbox for controlling gene expression
in the cyanobacterium synechococcus sp. strain pcc
7002 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4431953/ https://www.ncbi.nlm.nih.gov/pubmed/25216157 http://dx.doi.org/10.1021/sb500260k |
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