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Real-time pure shift (15)N HSQC of proteins: a real improvement in resolution and sensitivity
Spectral resolution in proton NMR spectroscopy is reduced by the splitting of resonances into multiplets due to the effect of homonuclear scalar couplings. Although these effects are often hidden in protein NMR spectroscopy by low digital resolution and routine apodization, behind the scenes homonuc...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Netherlands
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4432093/ https://www.ncbi.nlm.nih.gov/pubmed/25737243 http://dx.doi.org/10.1007/s10858-015-9913-z |
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author | Kiraly, Peter Adams, Ralph W. Paudel, Liladhar Foroozandeh, Mohammadali Aguilar, Juan A. Timári, István Cliff, Matthew J. Nilsson, Mathias Sándor, Péter Batta, Gyula Waltho, Jonathan P. Kövér, Katalin E. Morris, Gareth A. |
author_facet | Kiraly, Peter Adams, Ralph W. Paudel, Liladhar Foroozandeh, Mohammadali Aguilar, Juan A. Timári, István Cliff, Matthew J. Nilsson, Mathias Sándor, Péter Batta, Gyula Waltho, Jonathan P. Kövér, Katalin E. Morris, Gareth A. |
author_sort | Kiraly, Peter |
collection | PubMed |
description | Spectral resolution in proton NMR spectroscopy is reduced by the splitting of resonances into multiplets due to the effect of homonuclear scalar couplings. Although these effects are often hidden in protein NMR spectroscopy by low digital resolution and routine apodization, behind the scenes homonuclear scalar couplings increase spectral overcrowding. The possibilities for biomolecular NMR offered by new pure shift NMR methods are illustrated here. Both resolution and sensitivity are improved, without any increase in experiment time. In these experiments, free induction decays are collected in short bursts of data acquisition, with durations short on the timescale of J-evolution, interspersed with suitable refocusing elements. The net effect is real-time (t (2)) broadband homodecoupling, suppressing the multiplet structure caused by proton–proton interactions. The key feature of the refocusing elements is that they discriminate between the resonances of active (observed) and passive (coupling partner) spins. This can be achieved either by using band-selective refocusing or by the BIRD element, in both cases accompanied by a nonselective 180° proton pulse. The latter method selects the active spins based on their one-bond heteronuclear J-coupling to (15)N, while the former selects a region of the (1)H spectrum. Several novel pure shift experiments are presented, and the improvements in resolution and sensitivity they provide are evaluated for representative samples: the N-terminal domain of PGK; ubiquitin; and two mutants of the small antifungal protein PAF. These new experiments, delivering improved sensitivity and resolution, have the potential to replace the current standard HSQC experiments. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10858-015-9913-z) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4432093 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-44320932015-05-19 Real-time pure shift (15)N HSQC of proteins: a real improvement in resolution and sensitivity Kiraly, Peter Adams, Ralph W. Paudel, Liladhar Foroozandeh, Mohammadali Aguilar, Juan A. Timári, István Cliff, Matthew J. Nilsson, Mathias Sándor, Péter Batta, Gyula Waltho, Jonathan P. Kövér, Katalin E. Morris, Gareth A. J Biomol NMR Article Spectral resolution in proton NMR spectroscopy is reduced by the splitting of resonances into multiplets due to the effect of homonuclear scalar couplings. Although these effects are often hidden in protein NMR spectroscopy by low digital resolution and routine apodization, behind the scenes homonuclear scalar couplings increase spectral overcrowding. The possibilities for biomolecular NMR offered by new pure shift NMR methods are illustrated here. Both resolution and sensitivity are improved, without any increase in experiment time. In these experiments, free induction decays are collected in short bursts of data acquisition, with durations short on the timescale of J-evolution, interspersed with suitable refocusing elements. The net effect is real-time (t (2)) broadband homodecoupling, suppressing the multiplet structure caused by proton–proton interactions. The key feature of the refocusing elements is that they discriminate between the resonances of active (observed) and passive (coupling partner) spins. This can be achieved either by using band-selective refocusing or by the BIRD element, in both cases accompanied by a nonselective 180° proton pulse. The latter method selects the active spins based on their one-bond heteronuclear J-coupling to (15)N, while the former selects a region of the (1)H spectrum. Several novel pure shift experiments are presented, and the improvements in resolution and sensitivity they provide are evaluated for representative samples: the N-terminal domain of PGK; ubiquitin; and two mutants of the small antifungal protein PAF. These new experiments, delivering improved sensitivity and resolution, have the potential to replace the current standard HSQC experiments. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10858-015-9913-z) contains supplementary material, which is available to authorized users. Springer Netherlands 2015-03-04 2015 /pmc/articles/PMC4432093/ /pubmed/25737243 http://dx.doi.org/10.1007/s10858-015-9913-z Text en © The Author(s) 2015 https://creativecommons.org/licenses/by/4.0/ Open AccessThis article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited. |
spellingShingle | Article Kiraly, Peter Adams, Ralph W. Paudel, Liladhar Foroozandeh, Mohammadali Aguilar, Juan A. Timári, István Cliff, Matthew J. Nilsson, Mathias Sándor, Péter Batta, Gyula Waltho, Jonathan P. Kövér, Katalin E. Morris, Gareth A. Real-time pure shift (15)N HSQC of proteins: a real improvement in resolution and sensitivity |
title | Real-time pure shift (15)N HSQC of proteins: a real improvement in resolution and sensitivity |
title_full | Real-time pure shift (15)N HSQC of proteins: a real improvement in resolution and sensitivity |
title_fullStr | Real-time pure shift (15)N HSQC of proteins: a real improvement in resolution and sensitivity |
title_full_unstemmed | Real-time pure shift (15)N HSQC of proteins: a real improvement in resolution and sensitivity |
title_short | Real-time pure shift (15)N HSQC of proteins: a real improvement in resolution and sensitivity |
title_sort | real-time pure shift (15)n hsqc of proteins: a real improvement in resolution and sensitivity |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4432093/ https://www.ncbi.nlm.nih.gov/pubmed/25737243 http://dx.doi.org/10.1007/s10858-015-9913-z |
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