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Quantitative Risk Stratification of Oral Leukoplakia with Exfoliative Cytology
Exfoliative cytology has been widely used for early diagnosis of oral squamous cell carcinoma (OSCC). Test outcome is reported as “negative”, “atypical” (defined as abnormal epithelial changes of uncertain diagnostic significance), and “positive” (defined as definitive cellular evidence of epithelia...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4433206/ https://www.ncbi.nlm.nih.gov/pubmed/25978541 http://dx.doi.org/10.1371/journal.pone.0126760 |
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author | Liu, Yao Li, Jianying Liu, Xiaoyong Liu, Xudong Khawar, Waqaar Zhang, Xinyan Wang, Fan Chen, Xiaoxin Sun, Zheng |
author_facet | Liu, Yao Li, Jianying Liu, Xiaoyong Liu, Xudong Khawar, Waqaar Zhang, Xinyan Wang, Fan Chen, Xiaoxin Sun, Zheng |
author_sort | Liu, Yao |
collection | PubMed |
description | Exfoliative cytology has been widely used for early diagnosis of oral squamous cell carcinoma (OSCC). Test outcome is reported as “negative”, “atypical” (defined as abnormal epithelial changes of uncertain diagnostic significance), and “positive” (defined as definitive cellular evidence of epithelial dysplasia or carcinoma). The major challenge is how to properly manage the “atypical” patients in order to diagnose OSCC early and prevent OSCC. In this study, we collected exfoliative cytology data, histopathology data, and clinical data of normal subjects (n=102), oral leukoplakia (OLK) patients (n=82), and OSCC patients (n=93), and developed a data analysis procedure for quantitative risk stratification of OLK patients. This procedure involving a step called expert-guided data transformation and reconstruction (EdTAR) which allows automatic data processing and reconstruction and reveals informative signals for subsequent risk stratification. Modern machine learning techniques were utilized to build statistical prediction models on the reconstructed data. Among the several models tested using resampling methods for parameter pruning and performance evaluation, Support Vector Machine (SVM) was found to be optimal with a high sensitivity (median>0.98) and specificity (median>0.99). With the SVM model, we constructed an oral cancer risk index (OCRI) which may potentially guide clinical follow-up of OLK patients. One OLK patient with an initial OCRI of 0.88 developed OSCC after 40 months of follow-up. In conclusion, we have developed a statistical method for qualitative risk stratification of OLK patients. This method may potentially improve cost-effectiveness of clinical follow-up of OLK patients, and help design clinical chemoprevention trial for high-risk populations. |
format | Online Article Text |
id | pubmed-4433206 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-44332062015-05-27 Quantitative Risk Stratification of Oral Leukoplakia with Exfoliative Cytology Liu, Yao Li, Jianying Liu, Xiaoyong Liu, Xudong Khawar, Waqaar Zhang, Xinyan Wang, Fan Chen, Xiaoxin Sun, Zheng PLoS One Research Article Exfoliative cytology has been widely used for early diagnosis of oral squamous cell carcinoma (OSCC). Test outcome is reported as “negative”, “atypical” (defined as abnormal epithelial changes of uncertain diagnostic significance), and “positive” (defined as definitive cellular evidence of epithelial dysplasia or carcinoma). The major challenge is how to properly manage the “atypical” patients in order to diagnose OSCC early and prevent OSCC. In this study, we collected exfoliative cytology data, histopathology data, and clinical data of normal subjects (n=102), oral leukoplakia (OLK) patients (n=82), and OSCC patients (n=93), and developed a data analysis procedure for quantitative risk stratification of OLK patients. This procedure involving a step called expert-guided data transformation and reconstruction (EdTAR) which allows automatic data processing and reconstruction and reveals informative signals for subsequent risk stratification. Modern machine learning techniques were utilized to build statistical prediction models on the reconstructed data. Among the several models tested using resampling methods for parameter pruning and performance evaluation, Support Vector Machine (SVM) was found to be optimal with a high sensitivity (median>0.98) and specificity (median>0.99). With the SVM model, we constructed an oral cancer risk index (OCRI) which may potentially guide clinical follow-up of OLK patients. One OLK patient with an initial OCRI of 0.88 developed OSCC after 40 months of follow-up. In conclusion, we have developed a statistical method for qualitative risk stratification of OLK patients. This method may potentially improve cost-effectiveness of clinical follow-up of OLK patients, and help design clinical chemoprevention trial for high-risk populations. Public Library of Science 2015-05-15 /pmc/articles/PMC4433206/ /pubmed/25978541 http://dx.doi.org/10.1371/journal.pone.0126760 Text en © 2015 Liu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Liu, Yao Li, Jianying Liu, Xiaoyong Liu, Xudong Khawar, Waqaar Zhang, Xinyan Wang, Fan Chen, Xiaoxin Sun, Zheng Quantitative Risk Stratification of Oral Leukoplakia with Exfoliative Cytology |
title | Quantitative Risk Stratification of Oral Leukoplakia with Exfoliative Cytology |
title_full | Quantitative Risk Stratification of Oral Leukoplakia with Exfoliative Cytology |
title_fullStr | Quantitative Risk Stratification of Oral Leukoplakia with Exfoliative Cytology |
title_full_unstemmed | Quantitative Risk Stratification of Oral Leukoplakia with Exfoliative Cytology |
title_short | Quantitative Risk Stratification of Oral Leukoplakia with Exfoliative Cytology |
title_sort | quantitative risk stratification of oral leukoplakia with exfoliative cytology |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4433206/ https://www.ncbi.nlm.nih.gov/pubmed/25978541 http://dx.doi.org/10.1371/journal.pone.0126760 |
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