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Personalized Mortality Prediction Driven by Electronic Medical Data and a Patient Similarity Metric

BACKGROUND: Clinical outcome prediction normally employs static, one-size-fits-all models that perform well for the average patient but are sub-optimal for individual patients with unique characteristics. In the era of digital healthcare, it is feasible to dynamically personalize decision support by...

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Autores principales: Lee, Joon, Maslove, David M., Dubin, Joel A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4433333/
https://www.ncbi.nlm.nih.gov/pubmed/25978419
http://dx.doi.org/10.1371/journal.pone.0127428
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author Lee, Joon
Maslove, David M.
Dubin, Joel A.
author_facet Lee, Joon
Maslove, David M.
Dubin, Joel A.
author_sort Lee, Joon
collection PubMed
description BACKGROUND: Clinical outcome prediction normally employs static, one-size-fits-all models that perform well for the average patient but are sub-optimal for individual patients with unique characteristics. In the era of digital healthcare, it is feasible to dynamically personalize decision support by identifying and analyzing similar past patients, in a way that is analogous to personalized product recommendation in e-commerce. Our objectives were: 1) to prove that analyzing only similar patients leads to better outcome prediction performance than analyzing all available patients, and 2) to characterize the trade-off between training data size and the degree of similarity between the training data and the index patient for whom prediction is to be made. METHODS AND FINDINGS: We deployed a cosine-similarity-based patient similarity metric (PSM) to an intensive care unit (ICU) database to identify patients that are most similar to each patient and subsequently to custom-build 30-day mortality prediction models. Rich clinical and administrative data from the first day in the ICU from 17,152 adult ICU admissions were analyzed. The results confirmed that using data from only a small subset of most similar patients for training improves predictive performance in comparison with using data from all available patients. The results also showed that when too few similar patients are used for training, predictive performance degrades due to the effects of small sample sizes. Our PSM-based approach outperformed well-known ICU severity of illness scores. Although the improved prediction performance is achieved at the cost of increased computational burden, Big Data technologies can help realize personalized data-driven decision support at the point of care. CONCLUSIONS: The present study provides crucial empirical evidence for the promising potential of personalized data-driven decision support systems. With the increasing adoption of electronic medical record (EMR) systems, our novel medical data analytics contributes to meaningful use of EMR data.
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spelling pubmed-44333332015-05-27 Personalized Mortality Prediction Driven by Electronic Medical Data and a Patient Similarity Metric Lee, Joon Maslove, David M. Dubin, Joel A. PLoS One Research Article BACKGROUND: Clinical outcome prediction normally employs static, one-size-fits-all models that perform well for the average patient but are sub-optimal for individual patients with unique characteristics. In the era of digital healthcare, it is feasible to dynamically personalize decision support by identifying and analyzing similar past patients, in a way that is analogous to personalized product recommendation in e-commerce. Our objectives were: 1) to prove that analyzing only similar patients leads to better outcome prediction performance than analyzing all available patients, and 2) to characterize the trade-off between training data size and the degree of similarity between the training data and the index patient for whom prediction is to be made. METHODS AND FINDINGS: We deployed a cosine-similarity-based patient similarity metric (PSM) to an intensive care unit (ICU) database to identify patients that are most similar to each patient and subsequently to custom-build 30-day mortality prediction models. Rich clinical and administrative data from the first day in the ICU from 17,152 adult ICU admissions were analyzed. The results confirmed that using data from only a small subset of most similar patients for training improves predictive performance in comparison with using data from all available patients. The results also showed that when too few similar patients are used for training, predictive performance degrades due to the effects of small sample sizes. Our PSM-based approach outperformed well-known ICU severity of illness scores. Although the improved prediction performance is achieved at the cost of increased computational burden, Big Data technologies can help realize personalized data-driven decision support at the point of care. CONCLUSIONS: The present study provides crucial empirical evidence for the promising potential of personalized data-driven decision support systems. With the increasing adoption of electronic medical record (EMR) systems, our novel medical data analytics contributes to meaningful use of EMR data. Public Library of Science 2015-05-15 /pmc/articles/PMC4433333/ /pubmed/25978419 http://dx.doi.org/10.1371/journal.pone.0127428 Text en © 2015 Lee et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Lee, Joon
Maslove, David M.
Dubin, Joel A.
Personalized Mortality Prediction Driven by Electronic Medical Data and a Patient Similarity Metric
title Personalized Mortality Prediction Driven by Electronic Medical Data and a Patient Similarity Metric
title_full Personalized Mortality Prediction Driven by Electronic Medical Data and a Patient Similarity Metric
title_fullStr Personalized Mortality Prediction Driven by Electronic Medical Data and a Patient Similarity Metric
title_full_unstemmed Personalized Mortality Prediction Driven by Electronic Medical Data and a Patient Similarity Metric
title_short Personalized Mortality Prediction Driven by Electronic Medical Data and a Patient Similarity Metric
title_sort personalized mortality prediction driven by electronic medical data and a patient similarity metric
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4433333/
https://www.ncbi.nlm.nih.gov/pubmed/25978419
http://dx.doi.org/10.1371/journal.pone.0127428
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