Cargando…
The TF-miRNA Coregulation Network in Oral Lichen Planus
Oral lichen planus (OLP) is a chronic inflammatory disease that affects oral mucosa, some of which may finally develop into oral squamous cell carcinoma. Therefore, pinpointing the molecular mechanisms underlying the pathogenesis of OLP is important to develop efficient treatments for OLP. Recently,...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4433662/ https://www.ncbi.nlm.nih.gov/pubmed/26064947 http://dx.doi.org/10.1155/2015/731264 |
_version_ | 1782371650623242240 |
---|---|
author | Zuo, Yu-Ling Gong, Di-Ping Li, Bi-Ze Zhao, Juan Zhou, Ling-Yue Shao, Fang-Yang Jin, Zhao He, Yuan |
author_facet | Zuo, Yu-Ling Gong, Di-Ping Li, Bi-Ze Zhao, Juan Zhou, Ling-Yue Shao, Fang-Yang Jin, Zhao He, Yuan |
author_sort | Zuo, Yu-Ling |
collection | PubMed |
description | Oral lichen planus (OLP) is a chronic inflammatory disease that affects oral mucosa, some of which may finally develop into oral squamous cell carcinoma. Therefore, pinpointing the molecular mechanisms underlying the pathogenesis of OLP is important to develop efficient treatments for OLP. Recently, the accumulation of the large amount of omics data, especially transcriptome data, provides opportunities to investigate OLPs from a systematic perspective. In this paper, assuming that the OLP associated genes have functional relationships, we present a new approach to identify OLP related gene modules from gene regulatory networks. In particular, we find that the gene modules regulated by both transcription factors (TFs) and microRNAs (miRNAs) play important roles in the pathogenesis of OLP and many genes in the modules have been reported to be related to OLP in the literature. |
format | Online Article Text |
id | pubmed-4433662 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-44336622015-06-10 The TF-miRNA Coregulation Network in Oral Lichen Planus Zuo, Yu-Ling Gong, Di-Ping Li, Bi-Ze Zhao, Juan Zhou, Ling-Yue Shao, Fang-Yang Jin, Zhao He, Yuan Biomed Res Int Research Article Oral lichen planus (OLP) is a chronic inflammatory disease that affects oral mucosa, some of which may finally develop into oral squamous cell carcinoma. Therefore, pinpointing the molecular mechanisms underlying the pathogenesis of OLP is important to develop efficient treatments for OLP. Recently, the accumulation of the large amount of omics data, especially transcriptome data, provides opportunities to investigate OLPs from a systematic perspective. In this paper, assuming that the OLP associated genes have functional relationships, we present a new approach to identify OLP related gene modules from gene regulatory networks. In particular, we find that the gene modules regulated by both transcription factors (TFs) and microRNAs (miRNAs) play important roles in the pathogenesis of OLP and many genes in the modules have been reported to be related to OLP in the literature. Hindawi Publishing Corporation 2015 2015-05-03 /pmc/articles/PMC4433662/ /pubmed/26064947 http://dx.doi.org/10.1155/2015/731264 Text en Copyright © 2015 Yu-Ling Zuo et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Zuo, Yu-Ling Gong, Di-Ping Li, Bi-Ze Zhao, Juan Zhou, Ling-Yue Shao, Fang-Yang Jin, Zhao He, Yuan The TF-miRNA Coregulation Network in Oral Lichen Planus |
title | The TF-miRNA Coregulation Network in Oral Lichen Planus |
title_full | The TF-miRNA Coregulation Network in Oral Lichen Planus |
title_fullStr | The TF-miRNA Coregulation Network in Oral Lichen Planus |
title_full_unstemmed | The TF-miRNA Coregulation Network in Oral Lichen Planus |
title_short | The TF-miRNA Coregulation Network in Oral Lichen Planus |
title_sort | tf-mirna coregulation network in oral lichen planus |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4433662/ https://www.ncbi.nlm.nih.gov/pubmed/26064947 http://dx.doi.org/10.1155/2015/731264 |
work_keys_str_mv | AT zuoyuling thetfmirnacoregulationnetworkinorallichenplanus AT gongdiping thetfmirnacoregulationnetworkinorallichenplanus AT libize thetfmirnacoregulationnetworkinorallichenplanus AT zhaojuan thetfmirnacoregulationnetworkinorallichenplanus AT zhoulingyue thetfmirnacoregulationnetworkinorallichenplanus AT shaofangyang thetfmirnacoregulationnetworkinorallichenplanus AT jinzhao thetfmirnacoregulationnetworkinorallichenplanus AT heyuan thetfmirnacoregulationnetworkinorallichenplanus AT zuoyuling tfmirnacoregulationnetworkinorallichenplanus AT gongdiping tfmirnacoregulationnetworkinorallichenplanus AT libize tfmirnacoregulationnetworkinorallichenplanus AT zhaojuan tfmirnacoregulationnetworkinorallichenplanus AT zhoulingyue tfmirnacoregulationnetworkinorallichenplanus AT shaofangyang tfmirnacoregulationnetworkinorallichenplanus AT jinzhao tfmirnacoregulationnetworkinorallichenplanus AT heyuan tfmirnacoregulationnetworkinorallichenplanus |