Genetic diversity of Albanian goat breeds revealed by mtDNA sequence variation

Albanian farmers have a long tradition in goat farming. Recently, several studies were carried out to determine genetic diversity of local goat populations, using molecular markers such as SNP (Single Nucleotide Polymorphisms), microsatellites and AFLP (Amplified Fragment Length Polymorphism). In th...

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Detalles Bibliográficos
Autores principales: Hoda, Anila, Biçoku, Ylli, Dobi, Petrit
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2014
Materias:
Articles; Biodiversity & Ecosystems
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4433870/
https://www.ncbi.nlm.nih.gov/pubmed/26019491
http://dx.doi.org/10.1080/13102818.2014.901672
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author Hoda, Anila
Biçoku, Ylli
Dobi, Petrit
author_facet Hoda, Anila
Biçoku, Ylli
Dobi, Petrit
author_sort Hoda, Anila
collection PubMed
description Albanian farmers have a long tradition in goat farming. Recently, several studies were carried out to determine genetic diversity of local goat populations, using molecular markers such as SNP (Single Nucleotide Polymorphisms), microsatellites and AFLP (Amplified Fragment Length Polymorphism). In the present study 77 mtDNA D-loop sequences from six different goat breeds were analysed. The results revealed 67 different haplotypes, with haplotype diversity ranging from 0.864 to 1 and nucleotide diversity values ranging from 0.016 to 0.106. The results showed that the studied breed grouped only in lineage A. The F (ST) analysis indicated that 98.7% of the variation was found within the goat breeds and only 1.3% among them.
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spelling pubmed-44338702015-05-25 Genetic diversity of Albanian goat breeds revealed by mtDNA sequence variation Hoda, Anila Biçoku, Ylli Dobi, Petrit Biotechnol Biotechnol Equip Articles; Biodiversity & Ecosystems Albanian farmers have a long tradition in goat farming. Recently, several studies were carried out to determine genetic diversity of local goat populations, using molecular markers such as SNP (Single Nucleotide Polymorphisms), microsatellites and AFLP (Amplified Fragment Length Polymorphism). In the present study 77 mtDNA D-loop sequences from six different goat breeds were analysed. The results revealed 67 different haplotypes, with haplotype diversity ranging from 0.864 to 1 and nucleotide diversity values ranging from 0.016 to 0.106. The results showed that the studied breed grouped only in lineage A. The F (ST) analysis indicated that 98.7% of the variation was found within the goat breeds and only 1.3% among them. Taylor & Francis 2014-01-02 2014-06-04 /pmc/articles/PMC4433870/ /pubmed/26019491 http://dx.doi.org/10.1080/13102818.2014.901672 Text en © 2014 The Author(s). Published by Taylor & Francis. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The moral rights of the named author(s) have been asserted.
spellingShingle Articles; Biodiversity & Ecosystems
Hoda, Anila
Biçoku, Ylli
Dobi, Petrit
Genetic diversity of Albanian goat breeds revealed by mtDNA sequence variation
title Genetic diversity of Albanian goat breeds revealed by mtDNA sequence variation
title_full Genetic diversity of Albanian goat breeds revealed by mtDNA sequence variation
title_fullStr Genetic diversity of Albanian goat breeds revealed by mtDNA sequence variation
title_full_unstemmed Genetic diversity of Albanian goat breeds revealed by mtDNA sequence variation
title_short Genetic diversity of Albanian goat breeds revealed by mtDNA sequence variation
title_sort genetic diversity of albanian goat breeds revealed by mtdna sequence variation
topic Articles; Biodiversity & Ecosystems
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4433870/
https://www.ncbi.nlm.nih.gov/pubmed/26019491
http://dx.doi.org/10.1080/13102818.2014.901672
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