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Genotyping of Listeria monocytogenes isolates from poultry carcasses using high resolution melting (HRM) analysis

An outbreak situation of human listeriosis requires a fast and accurate protocol for typing Listeria monocytogenes. Existing techniques are either characterized by low discriminatory power or are laborious and require several days to give a final result. Polymerase chain reaction (PCR) coupled with...

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Autores principales: Sakaridis, Ioannis, Ganopoulos, Ioannis, Madesis, Panagiotis, Tsaftaris, Athanasios, Argiriou, Anagnostis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4433902/
https://www.ncbi.nlm.nih.gov/pubmed/26019495
http://dx.doi.org/10.1080/13102818.2014.901681
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author Sakaridis, Ioannis
Ganopoulos, Ioannis
Madesis, Panagiotis
Tsaftaris, Athanasios
Argiriou, Anagnostis
author_facet Sakaridis, Ioannis
Ganopoulos, Ioannis
Madesis, Panagiotis
Tsaftaris, Athanasios
Argiriou, Anagnostis
author_sort Sakaridis, Ioannis
collection PubMed
description An outbreak situation of human listeriosis requires a fast and accurate protocol for typing Listeria monocytogenes. Existing techniques are either characterized by low discriminatory power or are laborious and require several days to give a final result. Polymerase chain reaction (PCR) coupled with high resolution melting (HRM) analysis was investigated in this study as an alternative tool for a rapid and precise genotyping of L. monocytogenes isolates. Fifty-five isolates of L. monocytogenes isolated from poultry carcasses and the environment of four slaughterhouses were typed by HRM analysis using two specific markers, internalin B and ssrA genes. The analysis of genotype confidence percentage of L. monocytogenes isolates produced by HRM analysis generated dendrograms with two major groups and several subgroups. Furthermore, the analysis of the HRM curves revealed that all L. monocytogenes isolates could easily be distinguished. In conclusion, HRM was proven to be a fast and powerful tool for genotyping isolates of L. monocytogenes.
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spelling pubmed-44339022015-05-25 Genotyping of Listeria monocytogenes isolates from poultry carcasses using high resolution melting (HRM) analysis Sakaridis, Ioannis Ganopoulos, Ioannis Madesis, Panagiotis Tsaftaris, Athanasios Argiriou, Anagnostis Biotechnol Biotechnol Equip Articles; Medical Biotechnology An outbreak situation of human listeriosis requires a fast and accurate protocol for typing Listeria monocytogenes. Existing techniques are either characterized by low discriminatory power or are laborious and require several days to give a final result. Polymerase chain reaction (PCR) coupled with high resolution melting (HRM) analysis was investigated in this study as an alternative tool for a rapid and precise genotyping of L. monocytogenes isolates. Fifty-five isolates of L. monocytogenes isolated from poultry carcasses and the environment of four slaughterhouses were typed by HRM analysis using two specific markers, internalin B and ssrA genes. The analysis of genotype confidence percentage of L. monocytogenes isolates produced by HRM analysis generated dendrograms with two major groups and several subgroups. Furthermore, the analysis of the HRM curves revealed that all L. monocytogenes isolates could easily be distinguished. In conclusion, HRM was proven to be a fast and powerful tool for genotyping isolates of L. monocytogenes. Taylor & Francis 2014-01-02 2014-05-06 /pmc/articles/PMC4433902/ /pubmed/26019495 http://dx.doi.org/10.1080/13102818.2014.901681 Text en © 2014 The Author(s). Published by Taylor & Francis. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The moral rights of the named author(s) have been asserted.
spellingShingle Articles; Medical Biotechnology
Sakaridis, Ioannis
Ganopoulos, Ioannis
Madesis, Panagiotis
Tsaftaris, Athanasios
Argiriou, Anagnostis
Genotyping of Listeria monocytogenes isolates from poultry carcasses using high resolution melting (HRM) analysis
title Genotyping of Listeria monocytogenes isolates from poultry carcasses using high resolution melting (HRM) analysis
title_full Genotyping of Listeria monocytogenes isolates from poultry carcasses using high resolution melting (HRM) analysis
title_fullStr Genotyping of Listeria monocytogenes isolates from poultry carcasses using high resolution melting (HRM) analysis
title_full_unstemmed Genotyping of Listeria monocytogenes isolates from poultry carcasses using high resolution melting (HRM) analysis
title_short Genotyping of Listeria monocytogenes isolates from poultry carcasses using high resolution melting (HRM) analysis
title_sort genotyping of listeria monocytogenes isolates from poultry carcasses using high resolution melting (hrm) analysis
topic Articles; Medical Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4433902/
https://www.ncbi.nlm.nih.gov/pubmed/26019495
http://dx.doi.org/10.1080/13102818.2014.901681
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