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A simple method for RNA isolation from various tissues of the tree Neolamarckia cadamba
Plant tissues contain abundant polysaccharides, phenolic compounds and other metabolites, which makes it difficult to isolate high-quality RNA from them. In addition, Neolamarckia cadamba contains large quantities of other components, particularly RNA-binding alkaloids, which makes the isolation eve...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4434054/ https://www.ncbi.nlm.nih.gov/pubmed/26019587 http://dx.doi.org/10.1080/13102818.2014.981086 |
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author | Ouyang, Kunxi Li, Juncheng Huang, Hao Que, Qingmin Li, Pei Chen, Xiaoyang |
author_facet | Ouyang, Kunxi Li, Juncheng Huang, Hao Que, Qingmin Li, Pei Chen, Xiaoyang |
author_sort | Ouyang, Kunxi |
collection | PubMed |
description | Plant tissues contain abundant polysaccharides, phenolic compounds and other metabolites, which makes it difficult to isolate high-quality RNA from them. In addition, Neolamarckia cadamba contains large quantities of other components, particularly RNA-binding alkaloids, which makes the isolation even more challenging. Here, we describe a concise and efficient RNA isolation method that combines the cetyltrimethyl ammonium bromide (CTAB) and Plant RNA Kit (Omega) protocols. Gel electrophoresis showed that RNA extracted from all tissues, using this protocol, was of good integrity and without DNA contamination. Furthermore, the isolated RNA was of high purity, with an A (260)/A (280) ratio of 2.1 and an A (260)/A (230) ratio of >2.0. The isolated RNA was also suitable for downstream applications, such as reverse transcription-polymerase chain reaction (RT-PCR) and quantitative RT-PCR (RT-qPCR). The RNA isolation method was also efficient for recalcitrant plant tissues. |
format | Online Article Text |
id | pubmed-4434054 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-44340542015-05-25 A simple method for RNA isolation from various tissues of the tree Neolamarckia cadamba Ouyang, Kunxi Li, Juncheng Huang, Hao Que, Qingmin Li, Pei Chen, Xiaoyang Biotechnol Biotechnol Equip Article; Agriculture and Environmental Biotechnology Plant tissues contain abundant polysaccharides, phenolic compounds and other metabolites, which makes it difficult to isolate high-quality RNA from them. In addition, Neolamarckia cadamba contains large quantities of other components, particularly RNA-binding alkaloids, which makes the isolation even more challenging. Here, we describe a concise and efficient RNA isolation method that combines the cetyltrimethyl ammonium bromide (CTAB) and Plant RNA Kit (Omega) protocols. Gel electrophoresis showed that RNA extracted from all tissues, using this protocol, was of good integrity and without DNA contamination. Furthermore, the isolated RNA was of high purity, with an A (260)/A (280) ratio of 2.1 and an A (260)/A (230) ratio of >2.0. The isolated RNA was also suitable for downstream applications, such as reverse transcription-polymerase chain reaction (RT-PCR) and quantitative RT-PCR (RT-qPCR). The RNA isolation method was also efficient for recalcitrant plant tissues. Taylor & Francis 2014-11-02 2014-11-21 /pmc/articles/PMC4434054/ /pubmed/26019587 http://dx.doi.org/10.1080/13102818.2014.981086 Text en © 2014 The Author(s). Published by Taylor & Francis. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/3.0/, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The moral rights of the named author(s) have been asserted. |
spellingShingle | Article; Agriculture and Environmental Biotechnology Ouyang, Kunxi Li, Juncheng Huang, Hao Que, Qingmin Li, Pei Chen, Xiaoyang A simple method for RNA isolation from various tissues of the tree Neolamarckia cadamba |
title | A simple method for RNA isolation from various tissues of the tree Neolamarckia cadamba
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title_full | A simple method for RNA isolation from various tissues of the tree Neolamarckia cadamba
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title_fullStr | A simple method for RNA isolation from various tissues of the tree Neolamarckia cadamba
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title_full_unstemmed | A simple method for RNA isolation from various tissues of the tree Neolamarckia cadamba
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title_short | A simple method for RNA isolation from various tissues of the tree Neolamarckia cadamba
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title_sort | simple method for rna isolation from various tissues of the tree neolamarckia cadamba |
topic | Article; Agriculture and Environmental Biotechnology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4434054/ https://www.ncbi.nlm.nih.gov/pubmed/26019587 http://dx.doi.org/10.1080/13102818.2014.981086 |
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