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Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population

Idiopathic inflammatory myopathies (IIMs) are autoimmune diseases influenced by genetic background and environmental factors. Recently, FAM167A-BLK gene has been identified as a potential genetic susceptibility locus for dermatomyositis (DM) in patients of European and Japanese populations. Our aim...

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Autores principales: Chen, Si, Wu, Wei, Li, Jing, Wang, Qian, Li, Yuan, Wu, Ziyan, Zheng, Wenjie, Wu, Qingjun, Wu, Chanyuan, Zhang, Fengchun, Li, Yongzhe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4438202/
https://www.ncbi.nlm.nih.gov/pubmed/25846585
http://dx.doi.org/10.1007/s12026-015-8646-0
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author Chen, Si
Wu, Wei
Li, Jing
Wang, Qian
Li, Yuan
Wu, Ziyan
Zheng, Wenjie
Wu, Qingjun
Wu, Chanyuan
Zhang, Fengchun
Li, Yongzhe
author_facet Chen, Si
Wu, Wei
Li, Jing
Wang, Qian
Li, Yuan
Wu, Ziyan
Zheng, Wenjie
Wu, Qingjun
Wu, Chanyuan
Zhang, Fengchun
Li, Yongzhe
author_sort Chen, Si
collection PubMed
description Idiopathic inflammatory myopathies (IIMs) are autoimmune diseases influenced by genetic background and environmental factors. Recently, FAM167A-BLK gene has been identified as a potential genetic susceptibility locus for dermatomyositis (DM) in patients of European and Japanese populations. Our aim here was to investigate the association between FAM167A-BLK polymorphisms and IIMs risk in Chinese Han. The FAM167A-BLK single nucleotide polymorphisms (SNPs) rs2736340, rs7812879, rs13277113, rs2618479, rs2254546 and rs2248932 were analyzed in polymyositis (PM) patients (n = 310), DM patients (n = 535) and 968 ethnically matched healthy controls, with the Sequenom MassArray system. Our present study demonstrated that strong allele association was observed in overall PM/DM and PM patients for rs2736340 (P(c) = 6.48 × 10(−3); P(c) = 0.013, respectively), rs7812879 (P(c) = 0.017; P(c) = 0.034, respectively) and rs13277113 (P(c) = 0.011; P(c) = 0.047, respectively). These three SNPs were significantly associated with interstitial lung disease (ILD) in overall PM/DM patients (all, P(c) < 0.05). The frequency of the five haplotypes of the five SNPs (rs2736340, rs7812879, rs13277113, rs2618479 and rs2254546) was also significantly different between overall PM/DM, PM or DM patients and healthy controls. This was the first study to demonstrate that the FAM167A-BLK polymorphisms were associated with Chinese PM/DM patients or these patients with ILD, indicating that PM/DM might share common gene with other autoimmune diseases.
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spelling pubmed-44382022015-05-20 Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population Chen, Si Wu, Wei Li, Jing Wang, Qian Li, Yuan Wu, Ziyan Zheng, Wenjie Wu, Qingjun Wu, Chanyuan Zhang, Fengchun Li, Yongzhe Immunol Res Article Idiopathic inflammatory myopathies (IIMs) are autoimmune diseases influenced by genetic background and environmental factors. Recently, FAM167A-BLK gene has been identified as a potential genetic susceptibility locus for dermatomyositis (DM) in patients of European and Japanese populations. Our aim here was to investigate the association between FAM167A-BLK polymorphisms and IIMs risk in Chinese Han. The FAM167A-BLK single nucleotide polymorphisms (SNPs) rs2736340, rs7812879, rs13277113, rs2618479, rs2254546 and rs2248932 were analyzed in polymyositis (PM) patients (n = 310), DM patients (n = 535) and 968 ethnically matched healthy controls, with the Sequenom MassArray system. Our present study demonstrated that strong allele association was observed in overall PM/DM and PM patients for rs2736340 (P(c) = 6.48 × 10(−3); P(c) = 0.013, respectively), rs7812879 (P(c) = 0.017; P(c) = 0.034, respectively) and rs13277113 (P(c) = 0.011; P(c) = 0.047, respectively). These three SNPs were significantly associated with interstitial lung disease (ILD) in overall PM/DM patients (all, P(c) < 0.05). The frequency of the five haplotypes of the five SNPs (rs2736340, rs7812879, rs13277113, rs2618479 and rs2254546) was also significantly different between overall PM/DM, PM or DM patients and healthy controls. This was the first study to demonstrate that the FAM167A-BLK polymorphisms were associated with Chinese PM/DM patients or these patients with ILD, indicating that PM/DM might share common gene with other autoimmune diseases. Springer US 2015-04-07 2015 /pmc/articles/PMC4438202/ /pubmed/25846585 http://dx.doi.org/10.1007/s12026-015-8646-0 Text en © The Author(s) 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Article
Chen, Si
Wu, Wei
Li, Jing
Wang, Qian
Li, Yuan
Wu, Ziyan
Zheng, Wenjie
Wu, Qingjun
Wu, Chanyuan
Zhang, Fengchun
Li, Yongzhe
Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population
title Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population
title_full Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population
title_fullStr Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population
title_full_unstemmed Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population
title_short Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population
title_sort single nucleotide polymorphisms in the fam167a-blk gene are associated with polymyositis/dermatomyositis in the han chinese population
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4438202/
https://www.ncbi.nlm.nih.gov/pubmed/25846585
http://dx.doi.org/10.1007/s12026-015-8646-0
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