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Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population
Idiopathic inflammatory myopathies (IIMs) are autoimmune diseases influenced by genetic background and environmental factors. Recently, FAM167A-BLK gene has been identified as a potential genetic susceptibility locus for dermatomyositis (DM) in patients of European and Japanese populations. Our aim...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4438202/ https://www.ncbi.nlm.nih.gov/pubmed/25846585 http://dx.doi.org/10.1007/s12026-015-8646-0 |
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author | Chen, Si Wu, Wei Li, Jing Wang, Qian Li, Yuan Wu, Ziyan Zheng, Wenjie Wu, Qingjun Wu, Chanyuan Zhang, Fengchun Li, Yongzhe |
author_facet | Chen, Si Wu, Wei Li, Jing Wang, Qian Li, Yuan Wu, Ziyan Zheng, Wenjie Wu, Qingjun Wu, Chanyuan Zhang, Fengchun Li, Yongzhe |
author_sort | Chen, Si |
collection | PubMed |
description | Idiopathic inflammatory myopathies (IIMs) are autoimmune diseases influenced by genetic background and environmental factors. Recently, FAM167A-BLK gene has been identified as a potential genetic susceptibility locus for dermatomyositis (DM) in patients of European and Japanese populations. Our aim here was to investigate the association between FAM167A-BLK polymorphisms and IIMs risk in Chinese Han. The FAM167A-BLK single nucleotide polymorphisms (SNPs) rs2736340, rs7812879, rs13277113, rs2618479, rs2254546 and rs2248932 were analyzed in polymyositis (PM) patients (n = 310), DM patients (n = 535) and 968 ethnically matched healthy controls, with the Sequenom MassArray system. Our present study demonstrated that strong allele association was observed in overall PM/DM and PM patients for rs2736340 (P(c) = 6.48 × 10(−3); P(c) = 0.013, respectively), rs7812879 (P(c) = 0.017; P(c) = 0.034, respectively) and rs13277113 (P(c) = 0.011; P(c) = 0.047, respectively). These three SNPs were significantly associated with interstitial lung disease (ILD) in overall PM/DM patients (all, P(c) < 0.05). The frequency of the five haplotypes of the five SNPs (rs2736340, rs7812879, rs13277113, rs2618479 and rs2254546) was also significantly different between overall PM/DM, PM or DM patients and healthy controls. This was the first study to demonstrate that the FAM167A-BLK polymorphisms were associated with Chinese PM/DM patients or these patients with ILD, indicating that PM/DM might share common gene with other autoimmune diseases. |
format | Online Article Text |
id | pubmed-4438202 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-44382022015-05-20 Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population Chen, Si Wu, Wei Li, Jing Wang, Qian Li, Yuan Wu, Ziyan Zheng, Wenjie Wu, Qingjun Wu, Chanyuan Zhang, Fengchun Li, Yongzhe Immunol Res Article Idiopathic inflammatory myopathies (IIMs) are autoimmune diseases influenced by genetic background and environmental factors. Recently, FAM167A-BLK gene has been identified as a potential genetic susceptibility locus for dermatomyositis (DM) in patients of European and Japanese populations. Our aim here was to investigate the association between FAM167A-BLK polymorphisms and IIMs risk in Chinese Han. The FAM167A-BLK single nucleotide polymorphisms (SNPs) rs2736340, rs7812879, rs13277113, rs2618479, rs2254546 and rs2248932 were analyzed in polymyositis (PM) patients (n = 310), DM patients (n = 535) and 968 ethnically matched healthy controls, with the Sequenom MassArray system. Our present study demonstrated that strong allele association was observed in overall PM/DM and PM patients for rs2736340 (P(c) = 6.48 × 10(−3); P(c) = 0.013, respectively), rs7812879 (P(c) = 0.017; P(c) = 0.034, respectively) and rs13277113 (P(c) = 0.011; P(c) = 0.047, respectively). These three SNPs were significantly associated with interstitial lung disease (ILD) in overall PM/DM patients (all, P(c) < 0.05). The frequency of the five haplotypes of the five SNPs (rs2736340, rs7812879, rs13277113, rs2618479 and rs2254546) was also significantly different between overall PM/DM, PM or DM patients and healthy controls. This was the first study to demonstrate that the FAM167A-BLK polymorphisms were associated with Chinese PM/DM patients or these patients with ILD, indicating that PM/DM might share common gene with other autoimmune diseases. Springer US 2015-04-07 2015 /pmc/articles/PMC4438202/ /pubmed/25846585 http://dx.doi.org/10.1007/s12026-015-8646-0 Text en © The Author(s) 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Article Chen, Si Wu, Wei Li, Jing Wang, Qian Li, Yuan Wu, Ziyan Zheng, Wenjie Wu, Qingjun Wu, Chanyuan Zhang, Fengchun Li, Yongzhe Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population |
title | Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population |
title_full | Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population |
title_fullStr | Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population |
title_full_unstemmed | Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population |
title_short | Single nucleotide polymorphisms in the FAM167A-BLK gene are associated with polymyositis/dermatomyositis in the Han Chinese population |
title_sort | single nucleotide polymorphisms in the fam167a-blk gene are associated with polymyositis/dermatomyositis in the han chinese population |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4438202/ https://www.ncbi.nlm.nih.gov/pubmed/25846585 http://dx.doi.org/10.1007/s12026-015-8646-0 |
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