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Two decades of warming increases diversity of a potentially lignolytic bacterial community

As Earth's climate warms, the massive stores of carbon found in soil are predicted to become depleted, and leave behind a smaller carbon pool that is less accessible to microbes. At a long-term forest soil-warming experiment in central Massachusetts, soil respiration and bacterial diversity hav...

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Autores principales: Pold, Grace, Melillo, Jerry M., DeAngelis, Kristen M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4438230/
https://www.ncbi.nlm.nih.gov/pubmed/26042112
http://dx.doi.org/10.3389/fmicb.2015.00480
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author Pold, Grace
Melillo, Jerry M.
DeAngelis, Kristen M.
author_facet Pold, Grace
Melillo, Jerry M.
DeAngelis, Kristen M.
author_sort Pold, Grace
collection PubMed
description As Earth's climate warms, the massive stores of carbon found in soil are predicted to become depleted, and leave behind a smaller carbon pool that is less accessible to microbes. At a long-term forest soil-warming experiment in central Massachusetts, soil respiration and bacterial diversity have increased, while fungal biomass and microbially-accessible soil carbon have decreased. Here, we evaluate how warming has affected the microbial community's capability to degrade chemically-complex soil carbon using lignin-amended BioSep beads. We profiled the bacterial and fungal communities using PCR-based methods and completed extracellular enzyme assays as a proxy for potential community function. We found that lignin-amended beads selected for a distinct community containing bacterial taxa closely related to known lignin degraders, as well as members of many genera not previously noted as capable of degrading lignin. Warming tended to drive bacterial community structure more strongly in the lignin beads, while the effect on the fungal community was limited to unamended beads. Of those bacterial operational taxonomic units (OTUs) enriched by the warming treatment, many were enriched uniquely on lignin-amended beads. These taxa may be contributing to enhanced soil respiration under warming despite reduced readily available C availability. In aggregate, these results suggest that there is genetic potential for chemically complex soil carbon degradation that may lead to extended elevated soil respiration with long-term warming.
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spelling pubmed-44382302015-06-03 Two decades of warming increases diversity of a potentially lignolytic bacterial community Pold, Grace Melillo, Jerry M. DeAngelis, Kristen M. Front Microbiol Microbiology As Earth's climate warms, the massive stores of carbon found in soil are predicted to become depleted, and leave behind a smaller carbon pool that is less accessible to microbes. At a long-term forest soil-warming experiment in central Massachusetts, soil respiration and bacterial diversity have increased, while fungal biomass and microbially-accessible soil carbon have decreased. Here, we evaluate how warming has affected the microbial community's capability to degrade chemically-complex soil carbon using lignin-amended BioSep beads. We profiled the bacterial and fungal communities using PCR-based methods and completed extracellular enzyme assays as a proxy for potential community function. We found that lignin-amended beads selected for a distinct community containing bacterial taxa closely related to known lignin degraders, as well as members of many genera not previously noted as capable of degrading lignin. Warming tended to drive bacterial community structure more strongly in the lignin beads, while the effect on the fungal community was limited to unamended beads. Of those bacterial operational taxonomic units (OTUs) enriched by the warming treatment, many were enriched uniquely on lignin-amended beads. These taxa may be contributing to enhanced soil respiration under warming despite reduced readily available C availability. In aggregate, these results suggest that there is genetic potential for chemically complex soil carbon degradation that may lead to extended elevated soil respiration with long-term warming. Frontiers Media S.A. 2015-05-20 /pmc/articles/PMC4438230/ /pubmed/26042112 http://dx.doi.org/10.3389/fmicb.2015.00480 Text en Copyright © 2015 Pold, Melillo and DeAngelis. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Pold, Grace
Melillo, Jerry M.
DeAngelis, Kristen M.
Two decades of warming increases diversity of a potentially lignolytic bacterial community
title Two decades of warming increases diversity of a potentially lignolytic bacterial community
title_full Two decades of warming increases diversity of a potentially lignolytic bacterial community
title_fullStr Two decades of warming increases diversity of a potentially lignolytic bacterial community
title_full_unstemmed Two decades of warming increases diversity of a potentially lignolytic bacterial community
title_short Two decades of warming increases diversity of a potentially lignolytic bacterial community
title_sort two decades of warming increases diversity of a potentially lignolytic bacterial community
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4438230/
https://www.ncbi.nlm.nih.gov/pubmed/26042112
http://dx.doi.org/10.3389/fmicb.2015.00480
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