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Applying the ARRIVE Guidelines to an In Vivo Database

The Animal Research: Reporting of In Vivo Experiments (ARRIVE) guidelines were developed to address the lack of reproducibility in biomedical animal studies and improve the communication of research findings. While intended to guide the preparation of peer-reviewed manuscripts, the principles of tra...

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Autores principales: Karp, Natasha A., Meehan, Terry F., Morgan, Hugh, Mason, Jeremy C., Blake, Andrew, Kurbatova, Natalja, Smedley, Damian, Jacobsen, Julius, Mott, Richard F., Iyer, Vivek, Matthews, Peter, Melvin, David G., Wells, Sara, Flenniken, Ann M., Masuya, Hiroshi, Wakana, Shigeharu, White, Jacqueline K., Lloyd, K. C. Kent, Reynolds, Corey L., Paylor, Richard, West, David B., Svenson, Karen L., Chesler, Elissa J., de Angelis, Martin Hrabě, Tocchini-Valentini, Glauco P., Sorg, Tania, Herault, Yann, Parkinson, Helen, Mallon, Ann-Marie, Brown, Steve D. M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4439173/
https://www.ncbi.nlm.nih.gov/pubmed/25992600
http://dx.doi.org/10.1371/journal.pbio.1002151
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author Karp, Natasha A.
Meehan, Terry F.
Morgan, Hugh
Mason, Jeremy C.
Blake, Andrew
Kurbatova, Natalja
Smedley, Damian
Jacobsen, Julius
Mott, Richard F.
Iyer, Vivek
Matthews, Peter
Melvin, David G.
Wells, Sara
Flenniken, Ann M.
Masuya, Hiroshi
Wakana, Shigeharu
White, Jacqueline K.
Lloyd, K. C. Kent
Reynolds, Corey L.
Paylor, Richard
West, David B.
Svenson, Karen L.
Chesler, Elissa J.
de Angelis, Martin Hrabě
Tocchini-Valentini, Glauco P.
Sorg, Tania
Herault, Yann
Parkinson, Helen
Mallon, Ann-Marie
Brown, Steve D. M.
author_facet Karp, Natasha A.
Meehan, Terry F.
Morgan, Hugh
Mason, Jeremy C.
Blake, Andrew
Kurbatova, Natalja
Smedley, Damian
Jacobsen, Julius
Mott, Richard F.
Iyer, Vivek
Matthews, Peter
Melvin, David G.
Wells, Sara
Flenniken, Ann M.
Masuya, Hiroshi
Wakana, Shigeharu
White, Jacqueline K.
Lloyd, K. C. Kent
Reynolds, Corey L.
Paylor, Richard
West, David B.
Svenson, Karen L.
Chesler, Elissa J.
de Angelis, Martin Hrabě
Tocchini-Valentini, Glauco P.
Sorg, Tania
Herault, Yann
Parkinson, Helen
Mallon, Ann-Marie
Brown, Steve D. M.
author_sort Karp, Natasha A.
collection PubMed
description The Animal Research: Reporting of In Vivo Experiments (ARRIVE) guidelines were developed to address the lack of reproducibility in biomedical animal studies and improve the communication of research findings. While intended to guide the preparation of peer-reviewed manuscripts, the principles of transparent reporting are also fundamental for in vivo databases. Here, we describe the benefits and challenges of applying the guidelines for the International Mouse Phenotyping Consortium (IMPC), whose goal is to produce and phenotype 20,000 knockout mouse strains in a reproducible manner across ten research centres. In addition to ensuring the transparency and reproducibility of the IMPC, the solutions to the challenges of applying the ARRIVE guidelines in the context of IMPC will provide a resource to help guide similar initiatives in the future.
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spelling pubmed-44391732015-05-29 Applying the ARRIVE Guidelines to an In Vivo Database Karp, Natasha A. Meehan, Terry F. Morgan, Hugh Mason, Jeremy C. Blake, Andrew Kurbatova, Natalja Smedley, Damian Jacobsen, Julius Mott, Richard F. Iyer, Vivek Matthews, Peter Melvin, David G. Wells, Sara Flenniken, Ann M. Masuya, Hiroshi Wakana, Shigeharu White, Jacqueline K. Lloyd, K. C. Kent Reynolds, Corey L. Paylor, Richard West, David B. Svenson, Karen L. Chesler, Elissa J. de Angelis, Martin Hrabě Tocchini-Valentini, Glauco P. Sorg, Tania Herault, Yann Parkinson, Helen Mallon, Ann-Marie Brown, Steve D. M. PLoS Biol Community Page The Animal Research: Reporting of In Vivo Experiments (ARRIVE) guidelines were developed to address the lack of reproducibility in biomedical animal studies and improve the communication of research findings. While intended to guide the preparation of peer-reviewed manuscripts, the principles of transparent reporting are also fundamental for in vivo databases. Here, we describe the benefits and challenges of applying the guidelines for the International Mouse Phenotyping Consortium (IMPC), whose goal is to produce and phenotype 20,000 knockout mouse strains in a reproducible manner across ten research centres. In addition to ensuring the transparency and reproducibility of the IMPC, the solutions to the challenges of applying the ARRIVE guidelines in the context of IMPC will provide a resource to help guide similar initiatives in the future. Public Library of Science 2015-05-20 /pmc/articles/PMC4439173/ /pubmed/25992600 http://dx.doi.org/10.1371/journal.pbio.1002151 Text en © 2015 Karp et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Community Page
Karp, Natasha A.
Meehan, Terry F.
Morgan, Hugh
Mason, Jeremy C.
Blake, Andrew
Kurbatova, Natalja
Smedley, Damian
Jacobsen, Julius
Mott, Richard F.
Iyer, Vivek
Matthews, Peter
Melvin, David G.
Wells, Sara
Flenniken, Ann M.
Masuya, Hiroshi
Wakana, Shigeharu
White, Jacqueline K.
Lloyd, K. C. Kent
Reynolds, Corey L.
Paylor, Richard
West, David B.
Svenson, Karen L.
Chesler, Elissa J.
de Angelis, Martin Hrabě
Tocchini-Valentini, Glauco P.
Sorg, Tania
Herault, Yann
Parkinson, Helen
Mallon, Ann-Marie
Brown, Steve D. M.
Applying the ARRIVE Guidelines to an In Vivo Database
title Applying the ARRIVE Guidelines to an In Vivo Database
title_full Applying the ARRIVE Guidelines to an In Vivo Database
title_fullStr Applying the ARRIVE Guidelines to an In Vivo Database
title_full_unstemmed Applying the ARRIVE Guidelines to an In Vivo Database
title_short Applying the ARRIVE Guidelines to an In Vivo Database
title_sort applying the arrive guidelines to an in vivo database
topic Community Page
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4439173/
https://www.ncbi.nlm.nih.gov/pubmed/25992600
http://dx.doi.org/10.1371/journal.pbio.1002151
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