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Segmentation of Bone with Region Based Active Contour Model in PD Weighted MR Images of Shoulder

Proton density (PD) weighted MR images present inhomogeneity problem, low signal to noise ratio (SNR) and cannot define bone borders clearly. Segmentation of PD weighted images is hampered with these properties of PD weighted images which even limit the visual inspection. The purpose of this study i...

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Detalles Bibliográficos
Autores principales: Sezer, Aysun, Sezer, Hasan Basri, Albayrak, Songul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4439611/
https://www.ncbi.nlm.nih.gov/pubmed/26064185
http://dx.doi.org/10.1155/2015/754894
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author Sezer, Aysun
Sezer, Hasan Basri
Albayrak, Songul
author_facet Sezer, Aysun
Sezer, Hasan Basri
Albayrak, Songul
author_sort Sezer, Aysun
collection PubMed
description Proton density (PD) weighted MR images present inhomogeneity problem, low signal to noise ratio (SNR) and cannot define bone borders clearly. Segmentation of PD weighted images is hampered with these properties of PD weighted images which even limit the visual inspection. The purpose of this study is to determine the effectiveness of segmentation of humeral head from axial PD MR images with active contour without edge (ACWE) model. We included 219 images from our original data set. We extended the use of speckle reducing anisotropic diffusion (SRAD) in PD MR images by estimation of standard deviation of noise (SDN) from ROI. To overcome the problem of initialization of the initial contour of these region based methods, the location of the initial contour was automatically determined with use of circular Hough transform. For comparison, signed pressure force (SPF), fuzzy C-means, and Gaussian mixture models were applied and segmentation results of all four methods were also compared with the manual segmentation results of an expert. Experimental results on our own database show promising results. This is the first study in the literature to segment normal and pathological humeral heads from PD weighted MR images.
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spelling pubmed-44396112015-06-10 Segmentation of Bone with Region Based Active Contour Model in PD Weighted MR Images of Shoulder Sezer, Aysun Sezer, Hasan Basri Albayrak, Songul Comput Math Methods Med Research Article Proton density (PD) weighted MR images present inhomogeneity problem, low signal to noise ratio (SNR) and cannot define bone borders clearly. Segmentation of PD weighted images is hampered with these properties of PD weighted images which even limit the visual inspection. The purpose of this study is to determine the effectiveness of segmentation of humeral head from axial PD MR images with active contour without edge (ACWE) model. We included 219 images from our original data set. We extended the use of speckle reducing anisotropic diffusion (SRAD) in PD MR images by estimation of standard deviation of noise (SDN) from ROI. To overcome the problem of initialization of the initial contour of these region based methods, the location of the initial contour was automatically determined with use of circular Hough transform. For comparison, signed pressure force (SPF), fuzzy C-means, and Gaussian mixture models were applied and segmentation results of all four methods were also compared with the manual segmentation results of an expert. Experimental results on our own database show promising results. This is the first study in the literature to segment normal and pathological humeral heads from PD weighted MR images. Hindawi Publishing Corporation 2015 2015-05-07 /pmc/articles/PMC4439611/ /pubmed/26064185 http://dx.doi.org/10.1155/2015/754894 Text en Copyright © 2015 Aysun Sezer et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Sezer, Aysun
Sezer, Hasan Basri
Albayrak, Songul
Segmentation of Bone with Region Based Active Contour Model in PD Weighted MR Images of Shoulder
title Segmentation of Bone with Region Based Active Contour Model in PD Weighted MR Images of Shoulder
title_full Segmentation of Bone with Region Based Active Contour Model in PD Weighted MR Images of Shoulder
title_fullStr Segmentation of Bone with Region Based Active Contour Model in PD Weighted MR Images of Shoulder
title_full_unstemmed Segmentation of Bone with Region Based Active Contour Model in PD Weighted MR Images of Shoulder
title_short Segmentation of Bone with Region Based Active Contour Model in PD Weighted MR Images of Shoulder
title_sort segmentation of bone with region based active contour model in pd weighted mr images of shoulder
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4439611/
https://www.ncbi.nlm.nih.gov/pubmed/26064185
http://dx.doi.org/10.1155/2015/754894
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