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Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia
OBJECTIVE: Partial sequence cloning of interferon receptor (IFNAR-1) of Columba livia. MATERIAL AND METHODS: In order to obtain a certain length (630 bp) of gene, a pair of primers was designed according to the conserved nucleotide sequence of Gallus (EU477527.1) and Taeniopygia guttata (XM_00218923...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Polish Society of Experimental and Clinical Immunology
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4440025/ https://www.ncbi.nlm.nih.gov/pubmed/26155117 http://dx.doi.org/10.5114/ceji.2014.43715 |
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author | Li, Chao Chang, Wei Shan |
author_facet | Li, Chao Chang, Wei Shan |
author_sort | Li, Chao |
collection | PubMed |
description | OBJECTIVE: Partial sequence cloning of interferon receptor (IFNAR-1) of Columba livia. MATERIAL AND METHODS: In order to obtain a certain length (630 bp) of gene, a pair of primers was designed according to the conserved nucleotide sequence of Gallus (EU477527.1) and Taeniopygia guttata (XM_002189232.1) IFNAR-1 gene fragment that was published by GenBank. Special primers were designed by the Race method to amplify the 3'terminal cDNA. RESULTS: The Columba livia IFNAR-1 displayed 88.5%, 80.5% and 73.8% nucleotide identity to Falco peregrinus, Gallus and Taeniopygia guttata, respectively. Phylogenetic analysis of the IFNAR1 gene showed that the relationship of Columba livia, Falco peregrinus and chicken had high homology. CONCLUSIONS: We successfully obtained a Columba livia IFNAR-1 gene partial sequence. Analysis of the genetic tree showed that the relationship of Columba livia and Falco peregrinus IFNAR-1 had high homology. This result can be used as reference for further research and practical application. |
format | Online Article Text |
id | pubmed-4440025 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Polish Society of Experimental and Clinical Immunology |
record_format | MEDLINE/PubMed |
spelling | pubmed-44400252015-07-07 Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia Li, Chao Chang, Wei Shan Cent Eur J Immunol Original Article OBJECTIVE: Partial sequence cloning of interferon receptor (IFNAR-1) of Columba livia. MATERIAL AND METHODS: In order to obtain a certain length (630 bp) of gene, a pair of primers was designed according to the conserved nucleotide sequence of Gallus (EU477527.1) and Taeniopygia guttata (XM_002189232.1) IFNAR-1 gene fragment that was published by GenBank. Special primers were designed by the Race method to amplify the 3'terminal cDNA. RESULTS: The Columba livia IFNAR-1 displayed 88.5%, 80.5% and 73.8% nucleotide identity to Falco peregrinus, Gallus and Taeniopygia guttata, respectively. Phylogenetic analysis of the IFNAR1 gene showed that the relationship of Columba livia, Falco peregrinus and chicken had high homology. CONCLUSIONS: We successfully obtained a Columba livia IFNAR-1 gene partial sequence. Analysis of the genetic tree showed that the relationship of Columba livia and Falco peregrinus IFNAR-1 had high homology. This result can be used as reference for further research and practical application. Polish Society of Experimental and Clinical Immunology 2014-06-27 2014 /pmc/articles/PMC4440025/ /pubmed/26155117 http://dx.doi.org/10.5114/ceji.2014.43715 Text en Copyright © Central European Journal of Immunology 2014 http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-Noncommercial 3.0 Unported License, permitting all non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Li, Chao Chang, Wei Shan Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia |
title | Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia
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title_full | Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia
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title_fullStr | Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia
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title_full_unstemmed | Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia
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title_short | Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia
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title_sort | molecular cloning and sequencing analysis of the interferon receptor (ifnar-1) from columba livia |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4440025/ https://www.ncbi.nlm.nih.gov/pubmed/26155117 http://dx.doi.org/10.5114/ceji.2014.43715 |
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