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Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia

OBJECTIVE: Partial sequence cloning of interferon receptor (IFNAR-1) of Columba livia. MATERIAL AND METHODS: In order to obtain a certain length (630 bp) of gene, a pair of primers was designed according to the conserved nucleotide sequence of Gallus (EU477527.1) and Taeniopygia guttata (XM_00218923...

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Autores principales: Li, Chao, Chang, Wei Shan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Polish Society of Experimental and Clinical Immunology 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4440025/
https://www.ncbi.nlm.nih.gov/pubmed/26155117
http://dx.doi.org/10.5114/ceji.2014.43715
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author Li, Chao
Chang, Wei Shan
author_facet Li, Chao
Chang, Wei Shan
author_sort Li, Chao
collection PubMed
description OBJECTIVE: Partial sequence cloning of interferon receptor (IFNAR-1) of Columba livia. MATERIAL AND METHODS: In order to obtain a certain length (630 bp) of gene, a pair of primers was designed according to the conserved nucleotide sequence of Gallus (EU477527.1) and Taeniopygia guttata (XM_002189232.1) IFNAR-1 gene fragment that was published by GenBank. Special primers were designed by the Race method to amplify the 3'terminal cDNA. RESULTS: The Columba livia IFNAR-1 displayed 88.5%, 80.5% and 73.8% nucleotide identity to Falco peregrinus, Gallus and Taeniopygia guttata, respectively. Phylogenetic analysis of the IFNAR1 gene showed that the relationship of Columba livia, Falco peregrinus and chicken had high homology. CONCLUSIONS: We successfully obtained a Columba livia IFNAR-1 gene partial sequence. Analysis of the genetic tree showed that the relationship of Columba livia and Falco peregrinus IFNAR-1 had high homology. This result can be used as reference for further research and practical application.
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spelling pubmed-44400252015-07-07 Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia Li, Chao Chang, Wei Shan Cent Eur J Immunol Original Article OBJECTIVE: Partial sequence cloning of interferon receptor (IFNAR-1) of Columba livia. MATERIAL AND METHODS: In order to obtain a certain length (630 bp) of gene, a pair of primers was designed according to the conserved nucleotide sequence of Gallus (EU477527.1) and Taeniopygia guttata (XM_002189232.1) IFNAR-1 gene fragment that was published by GenBank. Special primers were designed by the Race method to amplify the 3'terminal cDNA. RESULTS: The Columba livia IFNAR-1 displayed 88.5%, 80.5% and 73.8% nucleotide identity to Falco peregrinus, Gallus and Taeniopygia guttata, respectively. Phylogenetic analysis of the IFNAR1 gene showed that the relationship of Columba livia, Falco peregrinus and chicken had high homology. CONCLUSIONS: We successfully obtained a Columba livia IFNAR-1 gene partial sequence. Analysis of the genetic tree showed that the relationship of Columba livia and Falco peregrinus IFNAR-1 had high homology. This result can be used as reference for further research and practical application. Polish Society of Experimental and Clinical Immunology 2014-06-27 2014 /pmc/articles/PMC4440025/ /pubmed/26155117 http://dx.doi.org/10.5114/ceji.2014.43715 Text en Copyright © Central European Journal of Immunology 2014 http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-Noncommercial 3.0 Unported License, permitting all non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Li, Chao
Chang, Wei Shan
Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia
title Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia
title_full Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia
title_fullStr Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia
title_full_unstemmed Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia
title_short Molecular cloning and sequencing analysis of the interferon receptor (IFNAR-1) from Columba livia
title_sort molecular cloning and sequencing analysis of the interferon receptor (ifnar-1) from columba livia
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4440025/
https://www.ncbi.nlm.nih.gov/pubmed/26155117
http://dx.doi.org/10.5114/ceji.2014.43715
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