De Novo Genome Assembly of Grapevine Yellow Speckle Viroid 1 from a Grapevine Transcriptome

Grapevine yellow speckle viroid 1 (GYSVd1), which is a member of the genus Apscaviroid, causes yellow speckle disease in grapevines. Here, we report the complete de novo genome assembly of GYSVd1 from the grapevine transcriptome and identified 10 single nucleotide polymorphisms of GYSVd1 across the...

Descripción completa

Detalles Bibliográficos
Autores principales: Jo, Yeonhwa, Choi, Hoseong, Yoon, Ju-Yeon, Choi, Seung-Kook, Cho, Won Kyong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2015
Materias:
Viruses
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4440961/
https://www.ncbi.nlm.nih.gov/pubmed/25999581
http://dx.doi.org/10.1128/genomeA.00496-15
_version_ 1782372720969777152
author Jo, Yeonhwa
Choi, Hoseong
Yoon, Ju-Yeon
Choi, Seung-Kook
Cho, Won Kyong
author_facet Jo, Yeonhwa
Choi, Hoseong
Yoon, Ju-Yeon
Choi, Seung-Kook
Cho, Won Kyong
author_sort Jo, Yeonhwa
collection PubMed
description Grapevine yellow speckle viroid 1 (GYSVd1), which is a member of the genus Apscaviroid, causes yellow speckle disease in grapevines. Here, we report the complete de novo genome assembly of GYSVd1 from the grapevine transcriptome and identified 10 single nucleotide polymorphisms of GYSVd1 across the grapevine populations.
format Online
Article
Text
id pubmed-4440961
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-44409612015-05-25 De Novo Genome Assembly of Grapevine Yellow Speckle Viroid 1 from a Grapevine Transcriptome Jo, Yeonhwa Choi, Hoseong Yoon, Ju-Yeon Choi, Seung-Kook Cho, Won Kyong Genome Announc Viruses Grapevine yellow speckle viroid 1 (GYSVd1), which is a member of the genus Apscaviroid, causes yellow speckle disease in grapevines. Here, we report the complete de novo genome assembly of GYSVd1 from the grapevine transcriptome and identified 10 single nucleotide polymorphisms of GYSVd1 across the grapevine populations. American Society for Microbiology 2015-05-21 /pmc/articles/PMC4440961/ /pubmed/25999581 http://dx.doi.org/10.1128/genomeA.00496-15 Text en Copyright © 2015 Jo et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 3.0 Unported license (http://creativecommons.org/licenses/by/3.0/) .
spellingShingle Viruses
Jo, Yeonhwa
Choi, Hoseong
Yoon, Ju-Yeon
Choi, Seung-Kook
Cho, Won Kyong
De Novo Genome Assembly of Grapevine Yellow Speckle Viroid 1 from a Grapevine Transcriptome
title De Novo Genome Assembly of Grapevine Yellow Speckle Viroid 1 from a Grapevine Transcriptome
title_full De Novo Genome Assembly of Grapevine Yellow Speckle Viroid 1 from a Grapevine Transcriptome
title_fullStr De Novo Genome Assembly of Grapevine Yellow Speckle Viroid 1 from a Grapevine Transcriptome
title_full_unstemmed De Novo Genome Assembly of Grapevine Yellow Speckle Viroid 1 from a Grapevine Transcriptome
title_short De Novo Genome Assembly of Grapevine Yellow Speckle Viroid 1 from a Grapevine Transcriptome
title_sort de novo genome assembly of grapevine yellow speckle viroid 1 from a grapevine transcriptome
topic Viruses
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4440961/
https://www.ncbi.nlm.nih.gov/pubmed/25999581
http://dx.doi.org/10.1128/genomeA.00496-15
work_keys_str_mv AT joyeonhwa denovogenomeassemblyofgrapevineyellowspeckleviroid1fromagrapevinetranscriptome
AT choihoseong denovogenomeassemblyofgrapevineyellowspeckleviroid1fromagrapevinetranscriptome
AT yoonjuyeon denovogenomeassemblyofgrapevineyellowspeckleviroid1fromagrapevinetranscriptome
AT choiseungkook denovogenomeassemblyofgrapevineyellowspeckleviroid1fromagrapevinetranscriptome
AT chowonkyong denovogenomeassemblyofgrapevineyellowspeckleviroid1fromagrapevinetranscriptome

Ejemplares similares