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The Use of Nanotrap Particles in the Enhanced Detection of Rift Valley Fever Virus Nucleoprotein

BACKGROUND: Rift Valley fever virus (RVFV) is a highly pathogenic arthropod-borne virus that has a detrimental effect on both livestock and human populations. While there are several diagnostic methodologies available for RVFV detection, many are not sensitive enough to diagnose early infections. Fu...

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Autores principales: Shafagati, Nazly, Lundberg, Lindsay, Baer, Alan, Patanarut, Alexis, Fite, Katherine, Lepene, Benjamin, Kehn-Hall, Kylene
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4447397/
https://www.ncbi.nlm.nih.gov/pubmed/26020252
http://dx.doi.org/10.1371/journal.pone.0128215
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author Shafagati, Nazly
Lundberg, Lindsay
Baer, Alan
Patanarut, Alexis
Fite, Katherine
Lepene, Benjamin
Kehn-Hall, Kylene
author_facet Shafagati, Nazly
Lundberg, Lindsay
Baer, Alan
Patanarut, Alexis
Fite, Katherine
Lepene, Benjamin
Kehn-Hall, Kylene
author_sort Shafagati, Nazly
collection PubMed
description BACKGROUND: Rift Valley fever virus (RVFV) is a highly pathogenic arthropod-borne virus that has a detrimental effect on both livestock and human populations. While there are several diagnostic methodologies available for RVFV detection, many are not sensitive enough to diagnose early infections. Furthermore, detection may be hindered by high abundant proteins such as albumin. Previous findings have shown that Nanotrap particles can be used to significantly enhance detection of various small analytes of low abundance. We have expanded upon this repertoire to show that this simple and efficient sample preparation technology can drastically improve the detection of the RVFV nucleoprotein (NP), the most abundant and widely used viral protein for RVFV diagnostics. RESULTS: After screening multiple Nanotrap particle architectures, we found that one particle, NT45, was optimal for RVFV NP capture, as demonstrated by western blotting. NT45 significantly enhanced detection of the NP at levels undetectable without the technology. Importantly, we demonstrated that Nanotrap particles are capable of concentrating NP in a number of matrices, including infected cell lysates, viral supernatants, and animal sera. Specifically, NT45 enhanced detection of NP at various viral titers, multiplicity of infections, and time points. Our most dramatic results were observed in spiked serum samples, where high abundance serum proteins hindered detection of NP without Nanotrap particles. Nanotrap particles allowed for sample cleanup and subsequent detection of RVFV NP. Finally, we demonstrated that incubation of our samples with Nanotrap particles protects the NP from degradation over extended periods of time (up to 120 hours) and at elevated temperatures (at 37ºC). CONCLUSION: This study demonstrates that Nanotrap particles are capable of drastically lowering the limit of detection for RVFV NP by capturing, concentrating, and preserving RVFV NP in clinically relevant matrices. These studies can be extended to a wide range of pathogens and their analytes of diagnostic interest.
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spelling pubmed-44473972015-06-09 The Use of Nanotrap Particles in the Enhanced Detection of Rift Valley Fever Virus Nucleoprotein Shafagati, Nazly Lundberg, Lindsay Baer, Alan Patanarut, Alexis Fite, Katherine Lepene, Benjamin Kehn-Hall, Kylene PLoS One Research Article BACKGROUND: Rift Valley fever virus (RVFV) is a highly pathogenic arthropod-borne virus that has a detrimental effect on both livestock and human populations. While there are several diagnostic methodologies available for RVFV detection, many are not sensitive enough to diagnose early infections. Furthermore, detection may be hindered by high abundant proteins such as albumin. Previous findings have shown that Nanotrap particles can be used to significantly enhance detection of various small analytes of low abundance. We have expanded upon this repertoire to show that this simple and efficient sample preparation technology can drastically improve the detection of the RVFV nucleoprotein (NP), the most abundant and widely used viral protein for RVFV diagnostics. RESULTS: After screening multiple Nanotrap particle architectures, we found that one particle, NT45, was optimal for RVFV NP capture, as demonstrated by western blotting. NT45 significantly enhanced detection of the NP at levels undetectable without the technology. Importantly, we demonstrated that Nanotrap particles are capable of concentrating NP in a number of matrices, including infected cell lysates, viral supernatants, and animal sera. Specifically, NT45 enhanced detection of NP at various viral titers, multiplicity of infections, and time points. Our most dramatic results were observed in spiked serum samples, where high abundance serum proteins hindered detection of NP without Nanotrap particles. Nanotrap particles allowed for sample cleanup and subsequent detection of RVFV NP. Finally, we demonstrated that incubation of our samples with Nanotrap particles protects the NP from degradation over extended periods of time (up to 120 hours) and at elevated temperatures (at 37ºC). CONCLUSION: This study demonstrates that Nanotrap particles are capable of drastically lowering the limit of detection for RVFV NP by capturing, concentrating, and preserving RVFV NP in clinically relevant matrices. These studies can be extended to a wide range of pathogens and their analytes of diagnostic interest. Public Library of Science 2015-05-28 /pmc/articles/PMC4447397/ /pubmed/26020252 http://dx.doi.org/10.1371/journal.pone.0128215 Text en © 2015 Shafagati et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Shafagati, Nazly
Lundberg, Lindsay
Baer, Alan
Patanarut, Alexis
Fite, Katherine
Lepene, Benjamin
Kehn-Hall, Kylene
The Use of Nanotrap Particles in the Enhanced Detection of Rift Valley Fever Virus Nucleoprotein
title The Use of Nanotrap Particles in the Enhanced Detection of Rift Valley Fever Virus Nucleoprotein
title_full The Use of Nanotrap Particles in the Enhanced Detection of Rift Valley Fever Virus Nucleoprotein
title_fullStr The Use of Nanotrap Particles in the Enhanced Detection of Rift Valley Fever Virus Nucleoprotein
title_full_unstemmed The Use of Nanotrap Particles in the Enhanced Detection of Rift Valley Fever Virus Nucleoprotein
title_short The Use of Nanotrap Particles in the Enhanced Detection of Rift Valley Fever Virus Nucleoprotein
title_sort use of nanotrap particles in the enhanced detection of rift valley fever virus nucleoprotein
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4447397/
https://www.ncbi.nlm.nih.gov/pubmed/26020252
http://dx.doi.org/10.1371/journal.pone.0128215
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