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Population, diversity and characteristics of cellulolytic microorganisms from the Indo-Burma Biodiversity hotspot

Forest ecosystem harbour a large number of biotic components where cellulolytic microorganisms participate actively in the biotransformation of dead and decaying organic matter and soil nutrient cycling. This study explores the aerobic culturable cellulolytic microorganisms in the forest soils of No...

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Autores principales: Goyari, Sailendra, Devi, Shantibala S, Kalita, Mohan C, Talukdar, Narayan C
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4447715/
https://www.ncbi.nlm.nih.gov/pubmed/26034690
http://dx.doi.org/10.1186/2193-1801-3-700
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author Goyari, Sailendra
Devi, Shantibala S
Kalita, Mohan C
Talukdar, Narayan C
author_facet Goyari, Sailendra
Devi, Shantibala S
Kalita, Mohan C
Talukdar, Narayan C
author_sort Goyari, Sailendra
collection PubMed
description Forest ecosystem harbour a large number of biotic components where cellulolytic microorganisms participate actively in the biotransformation of dead and decaying organic matter and soil nutrient cycling. This study explores the aerobic culturable cellulolytic microorganisms in the forest soils of North East India. Soil samples rich in dead and decaying organic matter were collected from eight conserved forests during the season when microbes were found to be most active. Cellulolytic microorganisms were isolated using selective media in which cellulose was the sole carbon source. Population of culturable, aerobic, cellulolytic microorganisms were found to be higher at the incubation temperature that corresponds to the natural ambient temperature of the site of sample collection. Bacterial population was higher in all of the sites than fungal population. Bacterial population ranged from 1.91 × 10(5) to 3.35 × 10(6) CFU g(-1) dry soil while actinomycetes and fungal population ranged from 9.13 × 10(2) to 3.46 × 10(4) CFU g(-1) dry soil and 9.36 × 10(2) to 4.31 × 10(4) CFU g(-1) dry soil, respectively. It was observed that though many isolates showed activity on the CMC plate assay, very few isolates showed significant filter paper activity. Three cellulolytic fungal isolates showing high FPase activity were characterised, identified and submitted to GenBank as Talaromyces verruculosus SGMNPf3 (KC937053), Trichoderma gamsii SGSPf7 (KC937055) and Trichoderma atroviride SGBMf4 (KC937054).
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spelling pubmed-44477152015-06-01 Population, diversity and characteristics of cellulolytic microorganisms from the Indo-Burma Biodiversity hotspot Goyari, Sailendra Devi, Shantibala S Kalita, Mohan C Talukdar, Narayan C Springerplus Research Forest ecosystem harbour a large number of biotic components where cellulolytic microorganisms participate actively in the biotransformation of dead and decaying organic matter and soil nutrient cycling. This study explores the aerobic culturable cellulolytic microorganisms in the forest soils of North East India. Soil samples rich in dead and decaying organic matter were collected from eight conserved forests during the season when microbes were found to be most active. Cellulolytic microorganisms were isolated using selective media in which cellulose was the sole carbon source. Population of culturable, aerobic, cellulolytic microorganisms were found to be higher at the incubation temperature that corresponds to the natural ambient temperature of the site of sample collection. Bacterial population was higher in all of the sites than fungal population. Bacterial population ranged from 1.91 × 10(5) to 3.35 × 10(6) CFU g(-1) dry soil while actinomycetes and fungal population ranged from 9.13 × 10(2) to 3.46 × 10(4) CFU g(-1) dry soil and 9.36 × 10(2) to 4.31 × 10(4) CFU g(-1) dry soil, respectively. It was observed that though many isolates showed activity on the CMC plate assay, very few isolates showed significant filter paper activity. Three cellulolytic fungal isolates showing high FPase activity were characterised, identified and submitted to GenBank as Talaromyces verruculosus SGMNPf3 (KC937053), Trichoderma gamsii SGSPf7 (KC937055) and Trichoderma atroviride SGBMf4 (KC937054). Springer International Publishing 2014-11-28 /pmc/articles/PMC4447715/ /pubmed/26034690 http://dx.doi.org/10.1186/2193-1801-3-700 Text en © Goyari et al.; licensee Springer. 2014 This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited.
spellingShingle Research
Goyari, Sailendra
Devi, Shantibala S
Kalita, Mohan C
Talukdar, Narayan C
Population, diversity and characteristics of cellulolytic microorganisms from the Indo-Burma Biodiversity hotspot
title Population, diversity and characteristics of cellulolytic microorganisms from the Indo-Burma Biodiversity hotspot
title_full Population, diversity and characteristics of cellulolytic microorganisms from the Indo-Burma Biodiversity hotspot
title_fullStr Population, diversity and characteristics of cellulolytic microorganisms from the Indo-Burma Biodiversity hotspot
title_full_unstemmed Population, diversity and characteristics of cellulolytic microorganisms from the Indo-Burma Biodiversity hotspot
title_short Population, diversity and characteristics of cellulolytic microorganisms from the Indo-Burma Biodiversity hotspot
title_sort population, diversity and characteristics of cellulolytic microorganisms from the indo-burma biodiversity hotspot
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4447715/
https://www.ncbi.nlm.nih.gov/pubmed/26034690
http://dx.doi.org/10.1186/2193-1801-3-700
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