Draft Genome Sequences of 24 Microbial Strains Assembled from Direct Sequencing from 4 Stool Samples

The ability to assemble genomes from metagenomic sequencing avoids the need for culture and any associated culture biases. We assembled 24 essentially complete draft genomes from metagenomic pair-end and size-selected mate pair sequencing from 4 stool samples, 2 from subjects diagnosed with colorect...

Descripción completa

Detalles Bibliográficos
Autores principales: Jeraldo, Patricio, Hernández, Álvaro, White, Bryan A., O’Brien, Daniel, Ahlquist, David, Boardman, Lisa, Chia, Nicholas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2015
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4447905/
https://www.ncbi.nlm.nih.gov/pubmed/26021920
http://dx.doi.org/10.1128/genomeA.00526-15
_version_ 1782373634904424448
author Jeraldo, Patricio
Hernández, Álvaro
White, Bryan A.
O’Brien, Daniel
Ahlquist, David
Boardman, Lisa
Chia, Nicholas
author_facet Jeraldo, Patricio
Hernández, Álvaro
White, Bryan A.
O’Brien, Daniel
Ahlquist, David
Boardman, Lisa
Chia, Nicholas
author_sort Jeraldo, Patricio
collection PubMed
description The ability to assemble genomes from metagenomic sequencing avoids the need for culture and any associated culture biases. We assembled 24 essentially complete draft genomes from metagenomic pair-end and size-selected mate pair sequencing from 4 stool samples, 2 from subjects diagnosed with colorectal cancer and 2 from healthy controls.
format Online
Article
Text
id pubmed-4447905
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-44479052015-05-30 Draft Genome Sequences of 24 Microbial Strains Assembled from Direct Sequencing from 4 Stool Samples Jeraldo, Patricio Hernández, Álvaro White, Bryan A. O’Brien, Daniel Ahlquist, David Boardman, Lisa Chia, Nicholas Genome Announc Prokaryotes The ability to assemble genomes from metagenomic sequencing avoids the need for culture and any associated culture biases. We assembled 24 essentially complete draft genomes from metagenomic pair-end and size-selected mate pair sequencing from 4 stool samples, 2 from subjects diagnosed with colorectal cancer and 2 from healthy controls. American Society for Microbiology 2015-05-28 /pmc/articles/PMC4447905/ /pubmed/26021920 http://dx.doi.org/10.1128/genomeA.00526-15 Text en Copyright © 2015 Jeraldo et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 3.0 Unported license (http://creativecommons.org/licenses/by/3.0/) .
spellingShingle Prokaryotes
Jeraldo, Patricio
Hernández, Álvaro
White, Bryan A.
O’Brien, Daniel
Ahlquist, David
Boardman, Lisa
Chia, Nicholas
Draft Genome Sequences of 24 Microbial Strains Assembled from Direct Sequencing from 4 Stool Samples
title Draft Genome Sequences of 24 Microbial Strains Assembled from Direct Sequencing from 4 Stool Samples
title_full Draft Genome Sequences of 24 Microbial Strains Assembled from Direct Sequencing from 4 Stool Samples
title_fullStr Draft Genome Sequences of 24 Microbial Strains Assembled from Direct Sequencing from 4 Stool Samples
title_full_unstemmed Draft Genome Sequences of 24 Microbial Strains Assembled from Direct Sequencing from 4 Stool Samples
title_short Draft Genome Sequences of 24 Microbial Strains Assembled from Direct Sequencing from 4 Stool Samples
title_sort draft genome sequences of 24 microbial strains assembled from direct sequencing from 4 stool samples
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4447905/
https://www.ncbi.nlm.nih.gov/pubmed/26021920
http://dx.doi.org/10.1128/genomeA.00526-15
work_keys_str_mv AT jeraldopatricio draftgenomesequencesof24microbialstrainsassembledfromdirectsequencingfrom4stoolsamples
AT hernandezalvaro draftgenomesequencesof24microbialstrainsassembledfromdirectsequencingfrom4stoolsamples
AT whitebryana draftgenomesequencesof24microbialstrainsassembledfromdirectsequencingfrom4stoolsamples
AT obriendaniel draftgenomesequencesof24microbialstrainsassembledfromdirectsequencingfrom4stoolsamples
AT ahlquistdavid draftgenomesequencesof24microbialstrainsassembledfromdirectsequencingfrom4stoolsamples
AT boardmanlisa draftgenomesequencesof24microbialstrainsassembledfromdirectsequencingfrom4stoolsamples
AT chianicholas draftgenomesequencesof24microbialstrainsassembledfromdirectsequencingfrom4stoolsamples

Ejemplares similares