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A Spectral Graph Regression Model for Learning Brain Connectivity of Alzheimer’s Disease
Understanding network features of brain pathology is essential to reveal underpinnings of neurodegenerative diseases. In this paper, we introduce a novel graph regression model (GRM) for learning structural brain connectivity of Alzheimer's disease (AD) measured by amyloid-β deposits. The propo...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4449104/ https://www.ncbi.nlm.nih.gov/pubmed/26024224 http://dx.doi.org/10.1371/journal.pone.0128136 |
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author | Hu, Chenhui Cheng, Lin Sepulcre, Jorge Johnson, Keith A. Fakhri, Georges E. Lu, Yue M. Li, Quanzheng |
author_facet | Hu, Chenhui Cheng, Lin Sepulcre, Jorge Johnson, Keith A. Fakhri, Georges E. Lu, Yue M. Li, Quanzheng |
author_sort | Hu, Chenhui |
collection | PubMed |
description | Understanding network features of brain pathology is essential to reveal underpinnings of neurodegenerative diseases. In this paper, we introduce a novel graph regression model (GRM) for learning structural brain connectivity of Alzheimer's disease (AD) measured by amyloid-β deposits. The proposed GRM regards (11)C-labeled Pittsburgh Compound-B (PiB) positron emission tomography (PET) imaging data as smooth signals defined on an unknown graph. This graph is then estimated through an optimization framework, which fits the graph to the data with an adjustable level of uniformity of the connection weights. Under the assumed data model, results based on simulated data illustrate that our approach can accurately reconstruct the underlying network, often with better reconstruction than those obtained by both sample correlation and ℓ1-regularized partial correlation estimation. Evaluations performed upon PiB-PET imaging data of 30 AD and 40 elderly normal control (NC) subjects demonstrate that the connectivity patterns revealed by the GRM are easy to interpret and consistent with known pathology. Moreover, the hubs of the reconstructed networks match the cortical hubs given by functional MRI. The discriminative network features including both global connectivity measurements and degree statistics of specific nodes discovered from the AD and NC amyloid-beta networks provide new potential biomarkers for preclinical and clinical AD. |
format | Online Article Text |
id | pubmed-4449104 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-44491042015-06-09 A Spectral Graph Regression Model for Learning Brain Connectivity of Alzheimer’s Disease Hu, Chenhui Cheng, Lin Sepulcre, Jorge Johnson, Keith A. Fakhri, Georges E. Lu, Yue M. Li, Quanzheng PLoS One Research Article Understanding network features of brain pathology is essential to reveal underpinnings of neurodegenerative diseases. In this paper, we introduce a novel graph regression model (GRM) for learning structural brain connectivity of Alzheimer's disease (AD) measured by amyloid-β deposits. The proposed GRM regards (11)C-labeled Pittsburgh Compound-B (PiB) positron emission tomography (PET) imaging data as smooth signals defined on an unknown graph. This graph is then estimated through an optimization framework, which fits the graph to the data with an adjustable level of uniformity of the connection weights. Under the assumed data model, results based on simulated data illustrate that our approach can accurately reconstruct the underlying network, often with better reconstruction than those obtained by both sample correlation and ℓ1-regularized partial correlation estimation. Evaluations performed upon PiB-PET imaging data of 30 AD and 40 elderly normal control (NC) subjects demonstrate that the connectivity patterns revealed by the GRM are easy to interpret and consistent with known pathology. Moreover, the hubs of the reconstructed networks match the cortical hubs given by functional MRI. The discriminative network features including both global connectivity measurements and degree statistics of specific nodes discovered from the AD and NC amyloid-beta networks provide new potential biomarkers for preclinical and clinical AD. Public Library of Science 2015-05-29 /pmc/articles/PMC4449104/ /pubmed/26024224 http://dx.doi.org/10.1371/journal.pone.0128136 Text en © 2015 Hu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Hu, Chenhui Cheng, Lin Sepulcre, Jorge Johnson, Keith A. Fakhri, Georges E. Lu, Yue M. Li, Quanzheng A Spectral Graph Regression Model for Learning Brain Connectivity of Alzheimer’s Disease |
title | A Spectral Graph Regression Model for Learning Brain Connectivity of Alzheimer’s Disease |
title_full | A Spectral Graph Regression Model for Learning Brain Connectivity of Alzheimer’s Disease |
title_fullStr | A Spectral Graph Regression Model for Learning Brain Connectivity of Alzheimer’s Disease |
title_full_unstemmed | A Spectral Graph Regression Model for Learning Brain Connectivity of Alzheimer’s Disease |
title_short | A Spectral Graph Regression Model for Learning Brain Connectivity of Alzheimer’s Disease |
title_sort | spectral graph regression model for learning brain connectivity of alzheimer’s disease |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4449104/ https://www.ncbi.nlm.nih.gov/pubmed/26024224 http://dx.doi.org/10.1371/journal.pone.0128136 |
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