Cargando…
Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus
An uncultured non-photosynthetic basal lineage of the Cyanobacteria, the Melainabacteria, was recently characterised by metagenomic analyses of aphotic environmental samples. However, a predatory bacterium, Vampirovibrio chlorellavorus, originally described in 1972 appears to be the first cultured r...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4451040/ https://www.ncbi.nlm.nih.gov/pubmed/26038723 http://dx.doi.org/10.7717/peerj.968 |
_version_ | 1782374090390110208 |
---|---|
author | Soo, Rochelle M. Woodcroft, Ben J. Parks, Donovan H. Tyson, Gene W. Hugenholtz, Philip |
author_facet | Soo, Rochelle M. Woodcroft, Ben J. Parks, Donovan H. Tyson, Gene W. Hugenholtz, Philip |
author_sort | Soo, Rochelle M. |
collection | PubMed |
description | An uncultured non-photosynthetic basal lineage of the Cyanobacteria, the Melainabacteria, was recently characterised by metagenomic analyses of aphotic environmental samples. However, a predatory bacterium, Vampirovibrio chlorellavorus, originally described in 1972 appears to be the first cultured representative of the Melainabacteria based on a 16S rRNA sequence recovered from a lyophilised co-culture of the organism. Here, we sequenced the genome of V. chlorellavorus directly from 36 year-old lyophilised material that could not be resuscitated confirming its identity as a member of the Melainabacteria. We identified attributes in the genome that likely allow V. chlorellavorus to function as an obligate predator of the microalga Chlorella vulgaris, and predict that it is the first described predator to use an Agrobacterium tumefaciens-like conjugative type IV secretion system to invade its host. V. chlorellavorus is the first cyanobacterium recognised to have a predatory lifestyle and further supports the assertion that Melainabacteria are non-photosynthetic. |
format | Online Article Text |
id | pubmed-4451040 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-44510402015-06-02 Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus Soo, Rochelle M. Woodcroft, Ben J. Parks, Donovan H. Tyson, Gene W. Hugenholtz, Philip PeerJ Genomics An uncultured non-photosynthetic basal lineage of the Cyanobacteria, the Melainabacteria, was recently characterised by metagenomic analyses of aphotic environmental samples. However, a predatory bacterium, Vampirovibrio chlorellavorus, originally described in 1972 appears to be the first cultured representative of the Melainabacteria based on a 16S rRNA sequence recovered from a lyophilised co-culture of the organism. Here, we sequenced the genome of V. chlorellavorus directly from 36 year-old lyophilised material that could not be resuscitated confirming its identity as a member of the Melainabacteria. We identified attributes in the genome that likely allow V. chlorellavorus to function as an obligate predator of the microalga Chlorella vulgaris, and predict that it is the first described predator to use an Agrobacterium tumefaciens-like conjugative type IV secretion system to invade its host. V. chlorellavorus is the first cyanobacterium recognised to have a predatory lifestyle and further supports the assertion that Melainabacteria are non-photosynthetic. PeerJ Inc. 2015-05-21 /pmc/articles/PMC4451040/ /pubmed/26038723 http://dx.doi.org/10.7717/peerj.968 Text en © 2015 Soo et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Genomics Soo, Rochelle M. Woodcroft, Ben J. Parks, Donovan H. Tyson, Gene W. Hugenholtz, Philip Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus |
title | Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus |
title_full | Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus |
title_fullStr | Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus |
title_full_unstemmed | Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus |
title_short | Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus |
title_sort | back from the dead; the curious tale of the predatory cyanobacterium vampirovibrio chlorellavorus |
topic | Genomics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4451040/ https://www.ncbi.nlm.nih.gov/pubmed/26038723 http://dx.doi.org/10.7717/peerj.968 |
work_keys_str_mv | AT soorochellem backfromthedeadthecurioustaleofthepredatorycyanobacteriumvampirovibriochlorellavorus AT woodcroftbenj backfromthedeadthecurioustaleofthepredatorycyanobacteriumvampirovibriochlorellavorus AT parksdonovanh backfromthedeadthecurioustaleofthepredatorycyanobacteriumvampirovibriochlorellavorus AT tysongenew backfromthedeadthecurioustaleofthepredatorycyanobacteriumvampirovibriochlorellavorus AT hugenholtzphilip backfromthedeadthecurioustaleofthepredatorycyanobacteriumvampirovibriochlorellavorus |