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Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus

An uncultured non-photosynthetic basal lineage of the Cyanobacteria, the Melainabacteria, was recently characterised by metagenomic analyses of aphotic environmental samples. However, a predatory bacterium, Vampirovibrio chlorellavorus, originally described in 1972 appears to be the first cultured r...

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Autores principales: Soo, Rochelle M., Woodcroft, Ben J., Parks, Donovan H., Tyson, Gene W., Hugenholtz, Philip
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4451040/
https://www.ncbi.nlm.nih.gov/pubmed/26038723
http://dx.doi.org/10.7717/peerj.968
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author Soo, Rochelle M.
Woodcroft, Ben J.
Parks, Donovan H.
Tyson, Gene W.
Hugenholtz, Philip
author_facet Soo, Rochelle M.
Woodcroft, Ben J.
Parks, Donovan H.
Tyson, Gene W.
Hugenholtz, Philip
author_sort Soo, Rochelle M.
collection PubMed
description An uncultured non-photosynthetic basal lineage of the Cyanobacteria, the Melainabacteria, was recently characterised by metagenomic analyses of aphotic environmental samples. However, a predatory bacterium, Vampirovibrio chlorellavorus, originally described in 1972 appears to be the first cultured representative of the Melainabacteria based on a 16S rRNA sequence recovered from a lyophilised co-culture of the organism. Here, we sequenced the genome of V. chlorellavorus directly from 36 year-old lyophilised material that could not be resuscitated confirming its identity as a member of the Melainabacteria. We identified attributes in the genome that likely allow V. chlorellavorus to function as an obligate predator of the microalga Chlorella vulgaris, and predict that it is the first described predator to use an Agrobacterium tumefaciens-like conjugative type IV secretion system to invade its host. V. chlorellavorus is the first cyanobacterium recognised to have a predatory lifestyle and further supports the assertion that Melainabacteria are non-photosynthetic.
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spelling pubmed-44510402015-06-02 Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus Soo, Rochelle M. Woodcroft, Ben J. Parks, Donovan H. Tyson, Gene W. Hugenholtz, Philip PeerJ Genomics An uncultured non-photosynthetic basal lineage of the Cyanobacteria, the Melainabacteria, was recently characterised by metagenomic analyses of aphotic environmental samples. However, a predatory bacterium, Vampirovibrio chlorellavorus, originally described in 1972 appears to be the first cultured representative of the Melainabacteria based on a 16S rRNA sequence recovered from a lyophilised co-culture of the organism. Here, we sequenced the genome of V. chlorellavorus directly from 36 year-old lyophilised material that could not be resuscitated confirming its identity as a member of the Melainabacteria. We identified attributes in the genome that likely allow V. chlorellavorus to function as an obligate predator of the microalga Chlorella vulgaris, and predict that it is the first described predator to use an Agrobacterium tumefaciens-like conjugative type IV secretion system to invade its host. V. chlorellavorus is the first cyanobacterium recognised to have a predatory lifestyle and further supports the assertion that Melainabacteria are non-photosynthetic. PeerJ Inc. 2015-05-21 /pmc/articles/PMC4451040/ /pubmed/26038723 http://dx.doi.org/10.7717/peerj.968 Text en © 2015 Soo et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Genomics
Soo, Rochelle M.
Woodcroft, Ben J.
Parks, Donovan H.
Tyson, Gene W.
Hugenholtz, Philip
Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus
title Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus
title_full Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus
title_fullStr Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus
title_full_unstemmed Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus
title_short Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus
title_sort back from the dead; the curious tale of the predatory cyanobacterium vampirovibrio chlorellavorus
topic Genomics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4451040/
https://www.ncbi.nlm.nih.gov/pubmed/26038723
http://dx.doi.org/10.7717/peerj.968
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