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Ab initio simulation of diffractometer instrumental function for high-resolution X-ray diffraction
Modeling of the X-ray diffractometer instrumental function for a given optics configuration is important both for planning experiments and for the analysis of measured data. A fast and universal method for instrumental function simulation, suitable for fully automated computer realization and descri...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4453973/ https://www.ncbi.nlm.nih.gov/pubmed/26089760 http://dx.doi.org/10.1107/S1600576715006986 |
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author | Mikhalychev, Alexander Benediktovitch, Andrei Ulyanenkova, Tatjana Ulyanenkov, Alex |
author_facet | Mikhalychev, Alexander Benediktovitch, Andrei Ulyanenkova, Tatjana Ulyanenkov, Alex |
author_sort | Mikhalychev, Alexander |
collection | PubMed |
description | Modeling of the X-ray diffractometer instrumental function for a given optics configuration is important both for planning experiments and for the analysis of measured data. A fast and universal method for instrumental function simulation, suitable for fully automated computer realization and describing both coplanar and noncoplanar measurement geometries for any combination of X-ray optical elements, is proposed. The method can be identified as semi-analytical backward ray tracing and is based on the calculation of a detected signal as an integral of X-ray intensities for all the rays reaching the detector. The high speed of calculation is provided by the expressions for analytical integration over the spatial coordinates that describe the detection point. Consideration of the three-dimensional propagation of rays without restriction to the diffraction plane provides the applicability of the method for noncoplanar geometry and the accuracy for characterization of the signal from a two-dimensional detector. The correctness of the simulation algorithm is checked in the following two ways: by verifying the consistency of the calculated data with the patterns expected for certain simple limiting cases and by comparing measured reciprocal-space maps with the corresponding maps simulated by the proposed method for the same diffractometer configurations. Both kinds of tests demonstrate the agreement of the simulated instrumental function shape with the measured data. |
format | Online Article Text |
id | pubmed-4453973 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-44539732015-06-18 Ab initio simulation of diffractometer instrumental function for high-resolution X-ray diffraction Mikhalychev, Alexander Benediktovitch, Andrei Ulyanenkova, Tatjana Ulyanenkov, Alex J Appl Crystallogr Research Papers Modeling of the X-ray diffractometer instrumental function for a given optics configuration is important both for planning experiments and for the analysis of measured data. A fast and universal method for instrumental function simulation, suitable for fully automated computer realization and describing both coplanar and noncoplanar measurement geometries for any combination of X-ray optical elements, is proposed. The method can be identified as semi-analytical backward ray tracing and is based on the calculation of a detected signal as an integral of X-ray intensities for all the rays reaching the detector. The high speed of calculation is provided by the expressions for analytical integration over the spatial coordinates that describe the detection point. Consideration of the three-dimensional propagation of rays without restriction to the diffraction plane provides the applicability of the method for noncoplanar geometry and the accuracy for characterization of the signal from a two-dimensional detector. The correctness of the simulation algorithm is checked in the following two ways: by verifying the consistency of the calculated data with the patterns expected for certain simple limiting cases and by comparing measured reciprocal-space maps with the corresponding maps simulated by the proposed method for the same diffractometer configurations. Both kinds of tests demonstrate the agreement of the simulated instrumental function shape with the measured data. International Union of Crystallography 2015-05-09 /pmc/articles/PMC4453973/ /pubmed/26089760 http://dx.doi.org/10.1107/S1600576715006986 Text en © Mikhalychev et al. 2015 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Mikhalychev, Alexander Benediktovitch, Andrei Ulyanenkova, Tatjana Ulyanenkov, Alex Ab initio simulation of diffractometer instrumental function for high-resolution X-ray diffraction |
title |
Ab initio simulation of diffractometer instrumental function for high-resolution X-ray diffraction
|
title_full |
Ab initio simulation of diffractometer instrumental function for high-resolution X-ray diffraction
|
title_fullStr |
Ab initio simulation of diffractometer instrumental function for high-resolution X-ray diffraction
|
title_full_unstemmed |
Ab initio simulation of diffractometer instrumental function for high-resolution X-ray diffraction
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title_short |
Ab initio simulation of diffractometer instrumental function for high-resolution X-ray diffraction
|
title_sort | ab initio simulation of diffractometer instrumental function for high-resolution x-ray diffraction |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4453973/ https://www.ncbi.nlm.nih.gov/pubmed/26089760 http://dx.doi.org/10.1107/S1600576715006986 |
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