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Inferring the connectivity of coupled oscillators from time-series statistical similarity analysis
A system composed by interacting dynamical elements can be represented by a network, where the nodes represent the elements that constitute the system, and the links account for their interactions, which arise due to a variety of mechanisms, and which are often unknown. A popular method for inferrin...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4455306/ https://www.ncbi.nlm.nih.gov/pubmed/26042395 http://dx.doi.org/10.1038/srep10829 |
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author | Tirabassi, Giulio Sevilla-Escoboza, Ricardo Buldú, Javier M. Masoller, Cristina |
author_facet | Tirabassi, Giulio Sevilla-Escoboza, Ricardo Buldú, Javier M. Masoller, Cristina |
author_sort | Tirabassi, Giulio |
collection | PubMed |
description | A system composed by interacting dynamical elements can be represented by a network, where the nodes represent the elements that constitute the system, and the links account for their interactions, which arise due to a variety of mechanisms, and which are often unknown. A popular method for inferring the system connectivity (i.e., the set of links among pairs of nodes) is by performing a statistical similarity analysis of the time-series collected from the dynamics of the nodes. Here, by considering two systems of coupled oscillators (Kuramoto phase oscillators and Rössler chaotic electronic oscillators) with known and controllable coupling conditions, we aim at testing the performance of this inference method, by using linear and non linear statistical similarity measures. We find that, under adequate conditions, the network links can be perfectly inferred, i.e., no mistakes are made regarding the presence or absence of links. These conditions for perfect inference require: i) an appropriated choice of the observed variable to be analysed, ii) an appropriated interaction strength, and iii) an adequate thresholding of the similarity matrix. For the dynamical units considered here we find that the linear statistical similarity measure performs, in general, better than the non-linear ones. |
format | Online Article Text |
id | pubmed-4455306 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-44553062015-06-10 Inferring the connectivity of coupled oscillators from time-series statistical similarity analysis Tirabassi, Giulio Sevilla-Escoboza, Ricardo Buldú, Javier M. Masoller, Cristina Sci Rep Article A system composed by interacting dynamical elements can be represented by a network, where the nodes represent the elements that constitute the system, and the links account for their interactions, which arise due to a variety of mechanisms, and which are often unknown. A popular method for inferring the system connectivity (i.e., the set of links among pairs of nodes) is by performing a statistical similarity analysis of the time-series collected from the dynamics of the nodes. Here, by considering two systems of coupled oscillators (Kuramoto phase oscillators and Rössler chaotic electronic oscillators) with known and controllable coupling conditions, we aim at testing the performance of this inference method, by using linear and non linear statistical similarity measures. We find that, under adequate conditions, the network links can be perfectly inferred, i.e., no mistakes are made regarding the presence or absence of links. These conditions for perfect inference require: i) an appropriated choice of the observed variable to be analysed, ii) an appropriated interaction strength, and iii) an adequate thresholding of the similarity matrix. For the dynamical units considered here we find that the linear statistical similarity measure performs, in general, better than the non-linear ones. Nature Publishing Group 2015-06-04 /pmc/articles/PMC4455306/ /pubmed/26042395 http://dx.doi.org/10.1038/srep10829 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Tirabassi, Giulio Sevilla-Escoboza, Ricardo Buldú, Javier M. Masoller, Cristina Inferring the connectivity of coupled oscillators from time-series statistical similarity analysis |
title | Inferring the connectivity of coupled oscillators from time-series statistical similarity analysis |
title_full | Inferring the connectivity of coupled oscillators from time-series statistical similarity analysis |
title_fullStr | Inferring the connectivity of coupled oscillators from time-series statistical similarity analysis |
title_full_unstemmed | Inferring the connectivity of coupled oscillators from time-series statistical similarity analysis |
title_short | Inferring the connectivity of coupled oscillators from time-series statistical similarity analysis |
title_sort | inferring the connectivity of coupled oscillators from time-series statistical similarity analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4455306/ https://www.ncbi.nlm.nih.gov/pubmed/26042395 http://dx.doi.org/10.1038/srep10829 |
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