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Temporal Unmixing of Dynamic Fluorescent Images by Blind Source Separation Method with a Convex Framework
By recording a time series of tomographic images, dynamic fluorescence molecular tomography (FMT) allows exploring perfusion, biodistribution, and pharmacokinetics of labeled substances in vivo. Usually, dynamic tomographic images are first reconstructed frame by frame, and then unmixing based on pr...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4458298/ https://www.ncbi.nlm.nih.gov/pubmed/26089974 http://dx.doi.org/10.1155/2015/713424 |
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author | Chen, Duofang Liang, Jimin Guo, Kui |
author_facet | Chen, Duofang Liang, Jimin Guo, Kui |
author_sort | Chen, Duofang |
collection | PubMed |
description | By recording a time series of tomographic images, dynamic fluorescence molecular tomography (FMT) allows exploring perfusion, biodistribution, and pharmacokinetics of labeled substances in vivo. Usually, dynamic tomographic images are first reconstructed frame by frame, and then unmixing based on principle component analysis (PCA) or independent component analysis (ICA) is performed to detect and visualize functional structures with different kinetic patterns. PCA and ICA assume sources are statistically uncorrelated or independent and don't perform well when correlated sources are present. In this paper, we deduce the relationship between the measured imaging data and the kinetic patterns and present a temporal unmixing approach, which is based on nonnegative blind source separation (BSS) method with a convex analysis framework to separate the measured data. The presented method requires no assumption on source independence or zero correlations. Several numerical simulations and phantom experiments are conducted to investigate the performance of the proposed temporal unmixing method. The results indicate that it is feasible to unmix the measured data before the tomographic reconstruction and the BSS based method provides better unmixing quality compared with PCA and ICA. |
format | Online Article Text |
id | pubmed-4458298 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-44582982015-06-18 Temporal Unmixing of Dynamic Fluorescent Images by Blind Source Separation Method with a Convex Framework Chen, Duofang Liang, Jimin Guo, Kui Comput Math Methods Med Research Article By recording a time series of tomographic images, dynamic fluorescence molecular tomography (FMT) allows exploring perfusion, biodistribution, and pharmacokinetics of labeled substances in vivo. Usually, dynamic tomographic images are first reconstructed frame by frame, and then unmixing based on principle component analysis (PCA) or independent component analysis (ICA) is performed to detect and visualize functional structures with different kinetic patterns. PCA and ICA assume sources are statistically uncorrelated or independent and don't perform well when correlated sources are present. In this paper, we deduce the relationship between the measured imaging data and the kinetic patterns and present a temporal unmixing approach, which is based on nonnegative blind source separation (BSS) method with a convex analysis framework to separate the measured data. The presented method requires no assumption on source independence or zero correlations. Several numerical simulations and phantom experiments are conducted to investigate the performance of the proposed temporal unmixing method. The results indicate that it is feasible to unmix the measured data before the tomographic reconstruction and the BSS based method provides better unmixing quality compared with PCA and ICA. Hindawi Publishing Corporation 2015 2015-05-24 /pmc/articles/PMC4458298/ /pubmed/26089974 http://dx.doi.org/10.1155/2015/713424 Text en Copyright © 2015 Duofang Chen et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Chen, Duofang Liang, Jimin Guo, Kui Temporal Unmixing of Dynamic Fluorescent Images by Blind Source Separation Method with a Convex Framework |
title | Temporal Unmixing of Dynamic Fluorescent Images by Blind Source Separation Method with a Convex Framework |
title_full | Temporal Unmixing of Dynamic Fluorescent Images by Blind Source Separation Method with a Convex Framework |
title_fullStr | Temporal Unmixing of Dynamic Fluorescent Images by Blind Source Separation Method with a Convex Framework |
title_full_unstemmed | Temporal Unmixing of Dynamic Fluorescent Images by Blind Source Separation Method with a Convex Framework |
title_short | Temporal Unmixing of Dynamic Fluorescent Images by Blind Source Separation Method with a Convex Framework |
title_sort | temporal unmixing of dynamic fluorescent images by blind source separation method with a convex framework |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4458298/ https://www.ncbi.nlm.nih.gov/pubmed/26089974 http://dx.doi.org/10.1155/2015/713424 |
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