Cargando…
Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy
The detection and assessment of intravascular filling defects is important, because they may represent a process central to cerebral malaria pathogenesis: neurovascular sequestration. We have developed and validated a framework that can automatically detect intravascular filling defects in fluoresce...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4459173/ https://www.ncbi.nlm.nih.gov/pubmed/26053690 http://dx.doi.org/10.1038/srep11154 |
_version_ | 1782375180839944192 |
---|---|
author | Zhao, Yitian MacCormick, Ian J. C. Parry, David G. Beare, Nicholas A. V. Harding, Simon P. Zheng, Yalin |
author_facet | Zhao, Yitian MacCormick, Ian J. C. Parry, David G. Beare, Nicholas A. V. Harding, Simon P. Zheng, Yalin |
author_sort | Zhao, Yitian |
collection | PubMed |
description | The detection and assessment of intravascular filling defects is important, because they may represent a process central to cerebral malaria pathogenesis: neurovascular sequestration. We have developed and validated a framework that can automatically detect intravascular filling defects in fluorescein angiogram images. It first employs a state-of-the-art segmentation approach to extract the vessels from images and then divide them into individual segments by geometrical analysis. A feature vector based on the intensity and shape of saliency maps is generated to represent the level of abnormality of each vessel segment. An AdaBoost classifier with weighted cost coefficient is trained to classify the vessel segments into normal and abnormal categories. To demonstrate its effectiveness, we apply this framework to 6,358 vessel segments in images from 10 patients with malarial retinopathy. The test sensitivity, specificity, accuracy, and area under curve (AUC) are 74.7%, 73.5%, 74.1% and 74.2% respectively when compared to the reference standard of human expert manual annotations. This performance is comparable to the agreement that we find between human observers of intravascular filling defects. Our method will be a powerful new tool for studying malarial retinopathy. |
format | Online Article Text |
id | pubmed-4459173 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-44591732015-06-17 Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy Zhao, Yitian MacCormick, Ian J. C. Parry, David G. Beare, Nicholas A. V. Harding, Simon P. Zheng, Yalin Sci Rep Article The detection and assessment of intravascular filling defects is important, because they may represent a process central to cerebral malaria pathogenesis: neurovascular sequestration. We have developed and validated a framework that can automatically detect intravascular filling defects in fluorescein angiogram images. It first employs a state-of-the-art segmentation approach to extract the vessels from images and then divide them into individual segments by geometrical analysis. A feature vector based on the intensity and shape of saliency maps is generated to represent the level of abnormality of each vessel segment. An AdaBoost classifier with weighted cost coefficient is trained to classify the vessel segments into normal and abnormal categories. To demonstrate its effectiveness, we apply this framework to 6,358 vessel segments in images from 10 patients with malarial retinopathy. The test sensitivity, specificity, accuracy, and area under curve (AUC) are 74.7%, 73.5%, 74.1% and 74.2% respectively when compared to the reference standard of human expert manual annotations. This performance is comparable to the agreement that we find between human observers of intravascular filling defects. Our method will be a powerful new tool for studying malarial retinopathy. Nature Publishing Group 2015-06-08 /pmc/articles/PMC4459173/ /pubmed/26053690 http://dx.doi.org/10.1038/srep11154 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Zhao, Yitian MacCormick, Ian J. C. Parry, David G. Beare, Nicholas A. V. Harding, Simon P. Zheng, Yalin Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy |
title | Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy |
title_full | Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy |
title_fullStr | Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy |
title_full_unstemmed | Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy |
title_short | Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy |
title_sort | automated detection of vessel abnormalities on fluorescein angiogram in malarial retinopathy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4459173/ https://www.ncbi.nlm.nih.gov/pubmed/26053690 http://dx.doi.org/10.1038/srep11154 |
work_keys_str_mv | AT zhaoyitian automateddetectionofvesselabnormalitiesonfluoresceinangiograminmalarialretinopathy AT maccormickianjc automateddetectionofvesselabnormalitiesonfluoresceinangiograminmalarialretinopathy AT parrydavidg automateddetectionofvesselabnormalitiesonfluoresceinangiograminmalarialretinopathy AT bearenicholasav automateddetectionofvesselabnormalitiesonfluoresceinangiograminmalarialretinopathy AT hardingsimonp automateddetectionofvesselabnormalitiesonfluoresceinangiograminmalarialretinopathy AT zhengyalin automateddetectionofvesselabnormalitiesonfluoresceinangiograminmalarialretinopathy |