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Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy

The detection and assessment of intravascular filling defects is important, because they may represent a process central to cerebral malaria pathogenesis: neurovascular sequestration. We have developed and validated a framework that can automatically detect intravascular filling defects in fluoresce...

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Autores principales: Zhao, Yitian, MacCormick, Ian J. C., Parry, David G., Beare, Nicholas A. V., Harding, Simon P., Zheng, Yalin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4459173/
https://www.ncbi.nlm.nih.gov/pubmed/26053690
http://dx.doi.org/10.1038/srep11154
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author Zhao, Yitian
MacCormick, Ian J. C.
Parry, David G.
Beare, Nicholas A. V.
Harding, Simon P.
Zheng, Yalin
author_facet Zhao, Yitian
MacCormick, Ian J. C.
Parry, David G.
Beare, Nicholas A. V.
Harding, Simon P.
Zheng, Yalin
author_sort Zhao, Yitian
collection PubMed
description The detection and assessment of intravascular filling defects is important, because they may represent a process central to cerebral malaria pathogenesis: neurovascular sequestration. We have developed and validated a framework that can automatically detect intravascular filling defects in fluorescein angiogram images. It first employs a state-of-the-art segmentation approach to extract the vessels from images and then divide them into individual segments by geometrical analysis. A feature vector based on the intensity and shape of saliency maps is generated to represent the level of abnormality of each vessel segment. An AdaBoost classifier with weighted cost coefficient is trained to classify the vessel segments into normal and abnormal categories. To demonstrate its effectiveness, we apply this framework to 6,358 vessel segments in images from 10 patients with malarial retinopathy. The test sensitivity, specificity, accuracy, and area under curve (AUC) are 74.7%, 73.5%, 74.1% and 74.2% respectively when compared to the reference standard of human expert manual annotations. This performance is comparable to the agreement that we find between human observers of intravascular filling defects. Our method will be a powerful new tool for studying malarial retinopathy.
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spelling pubmed-44591732015-06-17 Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy Zhao, Yitian MacCormick, Ian J. C. Parry, David G. Beare, Nicholas A. V. Harding, Simon P. Zheng, Yalin Sci Rep Article The detection and assessment of intravascular filling defects is important, because they may represent a process central to cerebral malaria pathogenesis: neurovascular sequestration. We have developed and validated a framework that can automatically detect intravascular filling defects in fluorescein angiogram images. It first employs a state-of-the-art segmentation approach to extract the vessels from images and then divide them into individual segments by geometrical analysis. A feature vector based on the intensity and shape of saliency maps is generated to represent the level of abnormality of each vessel segment. An AdaBoost classifier with weighted cost coefficient is trained to classify the vessel segments into normal and abnormal categories. To demonstrate its effectiveness, we apply this framework to 6,358 vessel segments in images from 10 patients with malarial retinopathy. The test sensitivity, specificity, accuracy, and area under curve (AUC) are 74.7%, 73.5%, 74.1% and 74.2% respectively when compared to the reference standard of human expert manual annotations. This performance is comparable to the agreement that we find between human observers of intravascular filling defects. Our method will be a powerful new tool for studying malarial retinopathy. Nature Publishing Group 2015-06-08 /pmc/articles/PMC4459173/ /pubmed/26053690 http://dx.doi.org/10.1038/srep11154 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Zhao, Yitian
MacCormick, Ian J. C.
Parry, David G.
Beare, Nicholas A. V.
Harding, Simon P.
Zheng, Yalin
Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy
title Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy
title_full Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy
title_fullStr Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy
title_full_unstemmed Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy
title_short Automated Detection of Vessel Abnormalities on Fluorescein Angiogram in Malarial Retinopathy
title_sort automated detection of vessel abnormalities on fluorescein angiogram in malarial retinopathy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4459173/
https://www.ncbi.nlm.nih.gov/pubmed/26053690
http://dx.doi.org/10.1038/srep11154
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