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Crystal structures and hydrogen bonding in the anhydrous tryptaminium salts of the isomeric (2,4-dichlorophenoxy)acetic and (3,5-dichlorophenoxy)acetic acids
The anhydrous salts of 2-(1H-indol-3-yl)ethanamine (tryptamine) with isomeric (2,4-dichlorophenoxy)acetic acid (2,4-D) and (3,5-dichlorophenoxy)acetic (3,5-D), both C(10)H(13)N(2) (+)·C(8)H(5)Cl(2)O(3) (−) [(I) and (II), respectively], have been determined and their one-dimensional hydrogen-bo...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2015
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4459305/ https://www.ncbi.nlm.nih.gov/pubmed/26090147 http://dx.doi.org/10.1107/S205698901500907X |
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author | Smith, Graham Lynch, Daniel E. |
author_facet | Smith, Graham Lynch, Daniel E. |
author_sort | Smith, Graham |
collection | PubMed |
description | The anhydrous salts of 2-(1H-indol-3-yl)ethanamine (tryptamine) with isomeric (2,4-dichlorophenoxy)acetic acid (2,4-D) and (3,5-dichlorophenoxy)acetic (3,5-D), both C(10)H(13)N(2) (+)·C(8)H(5)Cl(2)O(3) (−) [(I) and (II), respectively], have been determined and their one-dimensional hydrogen-bonded polymeric structures are described. In the crystal of (I), the aminium H atoms are involved in three separate inter-species N—H⋯O hydrogen-bonding interactions, two with carboxylate O-atom acceptors and the third in an asymmetric three-centre bidentate carboxylate O,O′ chelate [graph set R (1) (2)(4)]. The indole H atom forms an N—H⋯O(carboxylate) hydrogen bond, extending the chain structure along the b-axis direction. In (II), two of the three aminium H atoms are also involved in N—H⋯O(carboxylate) hydrogen bonds similar to (I) but with the third, a three-centre asymmetric interaction with carboxylate and phenoxy O atoms is found [graph set R (1) (2)(5)]. The chain polymeric extension is also along b. There are no π–π ring interactions in either of the structures. The aminium side-chain conformations differ significantly between the two structures, reflecting the conformational ambivalence of the tryptaminium cation, as found also in the benzoate salts. |
format | Online Article Text |
id | pubmed-4459305 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-44593052015-06-18 Crystal structures and hydrogen bonding in the anhydrous tryptaminium salts of the isomeric (2,4-dichlorophenoxy)acetic and (3,5-dichlorophenoxy)acetic acids Smith, Graham Lynch, Daniel E. Acta Crystallogr E Crystallogr Commun Research Communications The anhydrous salts of 2-(1H-indol-3-yl)ethanamine (tryptamine) with isomeric (2,4-dichlorophenoxy)acetic acid (2,4-D) and (3,5-dichlorophenoxy)acetic (3,5-D), both C(10)H(13)N(2) (+)·C(8)H(5)Cl(2)O(3) (−) [(I) and (II), respectively], have been determined and their one-dimensional hydrogen-bonded polymeric structures are described. In the crystal of (I), the aminium H atoms are involved in three separate inter-species N—H⋯O hydrogen-bonding interactions, two with carboxylate O-atom acceptors and the third in an asymmetric three-centre bidentate carboxylate O,O′ chelate [graph set R (1) (2)(4)]. The indole H atom forms an N—H⋯O(carboxylate) hydrogen bond, extending the chain structure along the b-axis direction. In (II), two of the three aminium H atoms are also involved in N—H⋯O(carboxylate) hydrogen bonds similar to (I) but with the third, a three-centre asymmetric interaction with carboxylate and phenoxy O atoms is found [graph set R (1) (2)(5)]. The chain polymeric extension is also along b. There are no π–π ring interactions in either of the structures. The aminium side-chain conformations differ significantly between the two structures, reflecting the conformational ambivalence of the tryptaminium cation, as found also in the benzoate salts. International Union of Crystallography 2015-05-23 /pmc/articles/PMC4459305/ /pubmed/26090147 http://dx.doi.org/10.1107/S205698901500907X Text en © Smith and Lynch 2015 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/ |
spellingShingle | Research Communications Smith, Graham Lynch, Daniel E. Crystal structures and hydrogen bonding in the anhydrous tryptaminium salts of the isomeric (2,4-dichlorophenoxy)acetic and (3,5-dichlorophenoxy)acetic acids |
title | Crystal structures and hydrogen bonding in the anhydrous tryptaminium salts of the isomeric (2,4-dichlorophenoxy)acetic and (3,5-dichlorophenoxy)acetic acids |
title_full | Crystal structures and hydrogen bonding in the anhydrous tryptaminium salts of the isomeric (2,4-dichlorophenoxy)acetic and (3,5-dichlorophenoxy)acetic acids |
title_fullStr | Crystal structures and hydrogen bonding in the anhydrous tryptaminium salts of the isomeric (2,4-dichlorophenoxy)acetic and (3,5-dichlorophenoxy)acetic acids |
title_full_unstemmed | Crystal structures and hydrogen bonding in the anhydrous tryptaminium salts of the isomeric (2,4-dichlorophenoxy)acetic and (3,5-dichlorophenoxy)acetic acids |
title_short | Crystal structures and hydrogen bonding in the anhydrous tryptaminium salts of the isomeric (2,4-dichlorophenoxy)acetic and (3,5-dichlorophenoxy)acetic acids |
title_sort | crystal structures and hydrogen bonding in the anhydrous tryptaminium salts of the isomeric (2,4-dichlorophenoxy)acetic and (3,5-dichlorophenoxy)acetic acids |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4459305/ https://www.ncbi.nlm.nih.gov/pubmed/26090147 http://dx.doi.org/10.1107/S205698901500907X |
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