Cargando…

Data set for the proteomic inventory and quantitative analysis of chicken uterine fluid during eggshell biomineralization

Chicken eggshell is the protective barrier of the egg. It is a biomineral composed of 95% calcium carbonate on calcitic form and 3.5% organic matrix proteins. Mineralization process occurs in uterus into the uterine fluid. This acellular fluid contains ions and organic matrix proteins precursors whi...

Descripción completa

Detalles Bibliográficos
Autores principales: Marie, Pauline, Labas, Valérie, Brionne, Aurélien, Harichaux, Grégoire, Hennequet-Antier, Christelle, Nys, Yves, Gautron, Joël
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4459565/
https://www.ncbi.nlm.nih.gov/pubmed/26217689
http://dx.doi.org/10.1016/j.dib.2014.09.006
_version_ 1782375241350119424
author Marie, Pauline
Labas, Valérie
Brionne, Aurélien
Harichaux, Grégoire
Hennequet-Antier, Christelle
Nys, Yves
Gautron, Joël
author_facet Marie, Pauline
Labas, Valérie
Brionne, Aurélien
Harichaux, Grégoire
Hennequet-Antier, Christelle
Nys, Yves
Gautron, Joël
author_sort Marie, Pauline
collection PubMed
description Chicken eggshell is the protective barrier of the egg. It is a biomineral composed of 95% calcium carbonate on calcitic form and 3.5% organic matrix proteins. Mineralization process occurs in uterus into the uterine fluid. This acellular fluid contains ions and organic matrix proteins precursors which are interacting with the mineral phase and control crystal growth, eggshell structure and mechanical properties. We performed a proteomic approach and identified 308 uterine fluid proteins. Gene Ontology terms enrichments were determined to investigate their potential functions. Mass spectrometry analyses were also combined to label free quantitative analysis to determine the relative abundance of 96 proteins at initiation, rapid growth phase and termination of shell calcification. Sixty four showed differential abundance according to the mineralization stage. Their potential functions have been annotated. The complete proteomic, bioinformatic and functional analyses are reported in Marie et al., J. Proteomics (2015) [1].
format Online
Article
Text
id pubmed-4459565
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-44595652015-07-27 Data set for the proteomic inventory and quantitative analysis of chicken uterine fluid during eggshell biomineralization Marie, Pauline Labas, Valérie Brionne, Aurélien Harichaux, Grégoire Hennequet-Antier, Christelle Nys, Yves Gautron, Joël Data Brief Data Article Chicken eggshell is the protective barrier of the egg. It is a biomineral composed of 95% calcium carbonate on calcitic form and 3.5% organic matrix proteins. Mineralization process occurs in uterus into the uterine fluid. This acellular fluid contains ions and organic matrix proteins precursors which are interacting with the mineral phase and control crystal growth, eggshell structure and mechanical properties. We performed a proteomic approach and identified 308 uterine fluid proteins. Gene Ontology terms enrichments were determined to investigate their potential functions. Mass spectrometry analyses were also combined to label free quantitative analysis to determine the relative abundance of 96 proteins at initiation, rapid growth phase and termination of shell calcification. Sixty four showed differential abundance according to the mineralization stage. Their potential functions have been annotated. The complete proteomic, bioinformatic and functional analyses are reported in Marie et al., J. Proteomics (2015) [1]. Elsevier 2014-10-14 /pmc/articles/PMC4459565/ /pubmed/26217689 http://dx.doi.org/10.1016/j.dib.2014.09.006 Text en © 2014 The Authors http://creativecommons.org/licenses/by/3.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Data Article
Marie, Pauline
Labas, Valérie
Brionne, Aurélien
Harichaux, Grégoire
Hennequet-Antier, Christelle
Nys, Yves
Gautron, Joël
Data set for the proteomic inventory and quantitative analysis of chicken uterine fluid during eggshell biomineralization
title Data set for the proteomic inventory and quantitative analysis of chicken uterine fluid during eggshell biomineralization
title_full Data set for the proteomic inventory and quantitative analysis of chicken uterine fluid during eggshell biomineralization
title_fullStr Data set for the proteomic inventory and quantitative analysis of chicken uterine fluid during eggshell biomineralization
title_full_unstemmed Data set for the proteomic inventory and quantitative analysis of chicken uterine fluid during eggshell biomineralization
title_short Data set for the proteomic inventory and quantitative analysis of chicken uterine fluid during eggshell biomineralization
title_sort data set for the proteomic inventory and quantitative analysis of chicken uterine fluid during eggshell biomineralization
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4459565/
https://www.ncbi.nlm.nih.gov/pubmed/26217689
http://dx.doi.org/10.1016/j.dib.2014.09.006
work_keys_str_mv AT mariepauline datasetfortheproteomicinventoryandquantitativeanalysisofchickenuterinefluidduringeggshellbiomineralization
AT labasvalerie datasetfortheproteomicinventoryandquantitativeanalysisofchickenuterinefluidduringeggshellbiomineralization
AT brionneaurelien datasetfortheproteomicinventoryandquantitativeanalysisofchickenuterinefluidduringeggshellbiomineralization
AT harichauxgregoire datasetfortheproteomicinventoryandquantitativeanalysisofchickenuterinefluidduringeggshellbiomineralization
AT hennequetantierchristelle datasetfortheproteomicinventoryandquantitativeanalysisofchickenuterinefluidduringeggshellbiomineralization
AT nysyves datasetfortheproteomicinventoryandquantitativeanalysisofchickenuterinefluidduringeggshellbiomineralization
AT gautronjoel datasetfortheproteomicinventoryandquantitativeanalysisofchickenuterinefluidduringeggshellbiomineralization