BioAcoustica: a free and open repository and analysis platform for bioacoustics

We describe an online open repository and analysis platform, BioAcoustica (http://bio.acousti.ca), for recordings of wildlife sounds. Recordings can be annotated using a crowdsourced approach, allowing voice introductions and sections with extraneous noise to be removed from analyses. This system is...

Descripción completa

Detalles Bibliográficos
Autores principales: Baker, Edward, Price, Ben W., Rycroft, S. D., Hill, Jon, Smith, Vincent S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Original Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4460420/
https://www.ncbi.nlm.nih.gov/pubmed/26055102
http://dx.doi.org/10.1093/database/bav054
_version_ 1782375381763883008
author Baker, Edward
Price, Ben W.
Rycroft, S. D.
Hill, Jon
Smith, Vincent S.
author_facet Baker, Edward
Price, Ben W.
Rycroft, S. D.
Hill, Jon
Smith, Vincent S.
author_sort Baker, Edward
collection PubMed
description We describe an online open repository and analysis platform, BioAcoustica (http://bio.acousti.ca), for recordings of wildlife sounds. Recordings can be annotated using a crowdsourced approach, allowing voice introductions and sections with extraneous noise to be removed from analyses. This system is based on the Scratchpads virtual research environment, the BioVeL portal and the Taverna workflow management tool, which allows for analysis of recordings using a grid computing service. At present the analyses include spectrograms, oscillograms and dominant frequency analysis. Further analyses can be integrated to meet the needs of specific researchers or projects. Researchers can upload and annotate their recordings to supplement traditional publication. Database URL: http://bio.acousti.ca
format Online
Article
Text
id pubmed-4460420
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-44604202015-06-11 BioAcoustica: a free and open repository and analysis platform for bioacoustics Baker, Edward Price, Ben W. Rycroft, S. D. Hill, Jon Smith, Vincent S. Database (Oxford) Original Article We describe an online open repository and analysis platform, BioAcoustica (http://bio.acousti.ca), for recordings of wildlife sounds. Recordings can be annotated using a crowdsourced approach, allowing voice introductions and sections with extraneous noise to be removed from analyses. This system is based on the Scratchpads virtual research environment, the BioVeL portal and the Taverna workflow management tool, which allows for analysis of recordings using a grid computing service. At present the analyses include spectrograms, oscillograms and dominant frequency analysis. Further analyses can be integrated to meet the needs of specific researchers or projects. Researchers can upload and annotate their recordings to supplement traditional publication. Database URL: http://bio.acousti.ca Oxford University Press 2015-06-08 /pmc/articles/PMC4460420/ /pubmed/26055102 http://dx.doi.org/10.1093/database/bav054 Text en © The Author(s) 2015. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Baker, Edward
Price, Ben W.
Rycroft, S. D.
Hill, Jon
Smith, Vincent S.
BioAcoustica: a free and open repository and analysis platform for bioacoustics
title BioAcoustica: a free and open repository and analysis platform for bioacoustics
title_full BioAcoustica: a free and open repository and analysis platform for bioacoustics
title_fullStr BioAcoustica: a free and open repository and analysis platform for bioacoustics
title_full_unstemmed BioAcoustica: a free and open repository and analysis platform for bioacoustics
title_short BioAcoustica: a free and open repository and analysis platform for bioacoustics
title_sort bioacoustica: a free and open repository and analysis platform for bioacoustics
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4460420/
https://www.ncbi.nlm.nih.gov/pubmed/26055102
http://dx.doi.org/10.1093/database/bav054
work_keys_str_mv AT bakeredward bioacousticaafreeandopenrepositoryandanalysisplatformforbioacoustics
AT pricebenw bioacousticaafreeandopenrepositoryandanalysisplatformforbioacoustics
AT rycroftsd bioacousticaafreeandopenrepositoryandanalysisplatformforbioacoustics
AT hilljon bioacousticaafreeandopenrepositoryandanalysisplatformforbioacoustics
AT smithvincents bioacousticaafreeandopenrepositoryandanalysisplatformforbioacoustics

Ejemplares similares