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Identification association of drug-disease by using functional gene module for breast cancer
In oncology drug development, it is important to develop low risk drugs efficiently. Meanwhile, computational methods have been paid more and more attention in drug discovery. However, few studies attempt to discover the mutual gene modules shared by the drug and disease association. Here we introdu...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4460962/ https://www.ncbi.nlm.nih.gov/pubmed/26045063 http://dx.doi.org/10.1186/1755-8794-8-S2-S3 |
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author | Zhu, Lida Zhu, Fuxi |
author_facet | Zhu, Lida Zhu, Fuxi |
author_sort | Zhu, Lida |
collection | PubMed |
description | In oncology drug development, it is important to develop low risk drugs efficiently. Meanwhile, computational methods have been paid more and more attention in drug discovery. However, few studies attempt to discover the mutual gene modules shared by the drug and disease association. Here we introduce a novel method to identify repositioned drug for breast cancer by integrating the breast cancer survival data with the drug sensitivity information. Among the 140 drug candidates, we are able to filter 4 FDA approved drugs and identify 2 breast cancer drugs among 4 known breast cancer therapeutic drug in total. |
format | Online Article Text |
id | pubmed-4460962 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-44609622015-06-29 Identification association of drug-disease by using functional gene module for breast cancer Zhu, Lida Zhu, Fuxi BMC Med Genomics Research Article In oncology drug development, it is important to develop low risk drugs efficiently. Meanwhile, computational methods have been paid more and more attention in drug discovery. However, few studies attempt to discover the mutual gene modules shared by the drug and disease association. Here we introduce a novel method to identify repositioned drug for breast cancer by integrating the breast cancer survival data with the drug sensitivity information. Among the 140 drug candidates, we are able to filter 4 FDA approved drugs and identify 2 breast cancer drugs among 4 known breast cancer therapeutic drug in total. BioMed Central 2015-05-29 /pmc/articles/PMC4460962/ /pubmed/26045063 http://dx.doi.org/10.1186/1755-8794-8-S2-S3 Text en Copyright © 2015 Zhu and Zhu; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Zhu, Lida Zhu, Fuxi Identification association of drug-disease by using functional gene module for breast cancer |
title | Identification association of drug-disease by using functional gene module for breast cancer |
title_full | Identification association of drug-disease by using functional gene module for breast cancer |
title_fullStr | Identification association of drug-disease by using functional gene module for breast cancer |
title_full_unstemmed | Identification association of drug-disease by using functional gene module for breast cancer |
title_short | Identification association of drug-disease by using functional gene module for breast cancer |
title_sort | identification association of drug-disease by using functional gene module for breast cancer |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4460962/ https://www.ncbi.nlm.nih.gov/pubmed/26045063 http://dx.doi.org/10.1186/1755-8794-8-S2-S3 |
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