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A simple program to measure and analyse tree rings using Excel, R and SigmaScan

I present a new software that links a program for image analysis (SigmaScan), one for spreadsheets (Excel) and one for statistical analysis (R) for applications of tree-ring analysis. The first macro measures ring width marked by the user on scanned images, stores raw and detrended data in Excel and...

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Detalles Bibliográficos
Autor principal: Hietz, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Archeonatura 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4461182/
https://www.ncbi.nlm.nih.gov/pubmed/26109835
http://dx.doi.org/10.1016/j.dendro.2010.11.002
Descripción
Sumario:I present a new software that links a program for image analysis (SigmaScan), one for spreadsheets (Excel) and one for statistical analysis (R) for applications of tree-ring analysis. The first macro measures ring width marked by the user on scanned images, stores raw and detrended data in Excel and calculates the distance to the pith and inter-series correlations. A second macro measures darkness along a defined path to identify latewood–earlywood transition in conifers, and a third shows the potential for automatic detection of boundaries. Written in Visual Basic for Applications, the code makes use of the advantages of existing programs and is consequently very economic and relatively simple to adjust to the requirements of specific projects or to expand making use of already available code.