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A simple program to measure and analyse tree rings using Excel, R and SigmaScan

I present a new software that links a program for image analysis (SigmaScan), one for spreadsheets (Excel) and one for statistical analysis (R) for applications of tree-ring analysis. The first macro measures ring width marked by the user on scanned images, stores raw and detrended data in Excel and...

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Detalles Bibliográficos
Autor principal: Hietz, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Archeonatura 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4461182/
https://www.ncbi.nlm.nih.gov/pubmed/26109835
http://dx.doi.org/10.1016/j.dendro.2010.11.002
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author Hietz, Peter
author_facet Hietz, Peter
author_sort Hietz, Peter
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description I present a new software that links a program for image analysis (SigmaScan), one for spreadsheets (Excel) and one for statistical analysis (R) for applications of tree-ring analysis. The first macro measures ring width marked by the user on scanned images, stores raw and detrended data in Excel and calculates the distance to the pith and inter-series correlations. A second macro measures darkness along a defined path to identify latewood–earlywood transition in conifers, and a third shows the potential for automatic detection of boundaries. Written in Visual Basic for Applications, the code makes use of the advantages of existing programs and is consequently very economic and relatively simple to adjust to the requirements of specific projects or to expand making use of already available code.
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spelling pubmed-44611822015-06-22 A simple program to measure and analyse tree rings using Excel, R and SigmaScan Hietz, Peter Dendrochronologia (Verona) Technical Note I present a new software that links a program for image analysis (SigmaScan), one for spreadsheets (Excel) and one for statistical analysis (R) for applications of tree-ring analysis. The first macro measures ring width marked by the user on scanned images, stores raw and detrended data in Excel and calculates the distance to the pith and inter-series correlations. A second macro measures darkness along a defined path to identify latewood–earlywood transition in conifers, and a third shows the potential for automatic detection of boundaries. Written in Visual Basic for Applications, the code makes use of the advantages of existing programs and is consequently very economic and relatively simple to adjust to the requirements of specific projects or to expand making use of already available code. Archeonatura 2011 /pmc/articles/PMC4461182/ /pubmed/26109835 http://dx.doi.org/10.1016/j.dendro.2010.11.002 Text en © 2011 Elsevier GmbH. https://creativecommons.org/licenses/by-nc-nd/3.0/ Open Access under CC BY-NC-ND 3.0 (https://creativecommons.org/licenses/by-nc-nd/3.0/) license
spellingShingle Technical Note
Hietz, Peter
A simple program to measure and analyse tree rings using Excel, R and SigmaScan
title A simple program to measure and analyse tree rings using Excel, R and SigmaScan
title_full A simple program to measure and analyse tree rings using Excel, R and SigmaScan
title_fullStr A simple program to measure and analyse tree rings using Excel, R and SigmaScan
title_full_unstemmed A simple program to measure and analyse tree rings using Excel, R and SigmaScan
title_short A simple program to measure and analyse tree rings using Excel, R and SigmaScan
title_sort simple program to measure and analyse tree rings using excel, r and sigmascan
topic Technical Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4461182/
https://www.ncbi.nlm.nih.gov/pubmed/26109835
http://dx.doi.org/10.1016/j.dendro.2010.11.002
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