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BitMapper: an efficient all-mapper based on bit-vector computing

BACKGROUND: As the next-generation sequencing (NGS) technologies producing hundreds of millions of reads every day, a tremendous computational challenge is to map NGS reads to a given reference genome efficiently. However, existing methods of all-mappers, which aim at finding all mapping locations o...

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Detalles Bibliográficos
Autores principales: Cheng, Haoyu, Jiang, Huaipan, Yang, Jiaoyun, Xu, Yun, Shang, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4462005/
https://www.ncbi.nlm.nih.gov/pubmed/26063651
http://dx.doi.org/10.1186/s12859-015-0626-9