Draft Genome Sequence of the Bacterium Pseudomonas putida CBB5, Which Can Utilize Caffeine as a Sole Carbon and Nitrogen Source

Pseudomonas putida CBB5 was isolated from soil by enriching for growth on caffeine (1,3,7-trimethylxanthine). The draft genome of this strain is 6.9 Mb, with 5,941 predicted coding sequences. It includes the previously studied Alx gene cluster encoding alkylxanthine N-demethylase enzymes and other g...

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Detalles Bibliográficos
Autores principales: Quandt, Erik M., Summers, Ryan M., Subramanian, Mani V., Barrick, Jeffrey E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2015
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4463537/
https://www.ncbi.nlm.nih.gov/pubmed/26067973
http://dx.doi.org/10.1128/genomeA.00640-15
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author Quandt, Erik M.
Summers, Ryan M.
Subramanian, Mani V.
Barrick, Jeffrey E.
author_facet Quandt, Erik M.
Summers, Ryan M.
Subramanian, Mani V.
Barrick, Jeffrey E.
author_sort Quandt, Erik M.
collection PubMed
description Pseudomonas putida CBB5 was isolated from soil by enriching for growth on caffeine (1,3,7-trimethylxanthine). The draft genome of this strain is 6.9 Mb, with 5,941 predicted coding sequences. It includes the previously studied Alx gene cluster encoding alkylxanthine N-demethylase enzymes and other genes that enable the degradation of purine alkaloids.
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spelling pubmed-44635372015-06-18 Draft Genome Sequence of the Bacterium Pseudomonas putida CBB5, Which Can Utilize Caffeine as a Sole Carbon and Nitrogen Source Quandt, Erik M. Summers, Ryan M. Subramanian, Mani V. Barrick, Jeffrey E. Genome Announc Prokaryotes Pseudomonas putida CBB5 was isolated from soil by enriching for growth on caffeine (1,3,7-trimethylxanthine). The draft genome of this strain is 6.9 Mb, with 5,941 predicted coding sequences. It includes the previously studied Alx gene cluster encoding alkylxanthine N-demethylase enzymes and other genes that enable the degradation of purine alkaloids. American Society for Microbiology 2015-06-11 /pmc/articles/PMC4463537/ /pubmed/26067973 http://dx.doi.org/10.1128/genomeA.00640-15 Text en Copyright © 2015 Quandt et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 3.0 Unported license (http://creativecommons.org/licenses/by/3.0/) .
spellingShingle Prokaryotes
Quandt, Erik M.
Summers, Ryan M.
Subramanian, Mani V.
Barrick, Jeffrey E.
Draft Genome Sequence of the Bacterium Pseudomonas putida CBB5, Which Can Utilize Caffeine as a Sole Carbon and Nitrogen Source
title Draft Genome Sequence of the Bacterium Pseudomonas putida CBB5, Which Can Utilize Caffeine as a Sole Carbon and Nitrogen Source
title_full Draft Genome Sequence of the Bacterium Pseudomonas putida CBB5, Which Can Utilize Caffeine as a Sole Carbon and Nitrogen Source
title_fullStr Draft Genome Sequence of the Bacterium Pseudomonas putida CBB5, Which Can Utilize Caffeine as a Sole Carbon and Nitrogen Source
title_full_unstemmed Draft Genome Sequence of the Bacterium Pseudomonas putida CBB5, Which Can Utilize Caffeine as a Sole Carbon and Nitrogen Source
title_short Draft Genome Sequence of the Bacterium Pseudomonas putida CBB5, Which Can Utilize Caffeine as a Sole Carbon and Nitrogen Source
title_sort draft genome sequence of the bacterium pseudomonas putida cbb5, which can utilize caffeine as a sole carbon and nitrogen source
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4463537/
https://www.ncbi.nlm.nih.gov/pubmed/26067973
http://dx.doi.org/10.1128/genomeA.00640-15
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