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First principle investigation of the linker length effects on the thermodynamics of divalent pseudorotaxanes
The Gibbs energies of association (Gibbs free (binding) energies) for divalent crown-8/ammonium pseudorotaxanes are determined by investigating the influence of different linkers onto the binding. Calculations are performed with density functional theory including dispersion corrections. The transla...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Beilstein-Institut
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4464336/ https://www.ncbi.nlm.nih.gov/pubmed/26124872 http://dx.doi.org/10.3762/bjoc.11.78 |
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author | Achazi, Andreas J Mollenhauer, Doreen Paulus, Beate |
author_facet | Achazi, Andreas J Mollenhauer, Doreen Paulus, Beate |
author_sort | Achazi, Andreas J |
collection | PubMed |
description | The Gibbs energies of association (Gibbs free (binding) energies) for divalent crown-8/ammonium pseudorotaxanes are determined by investigating the influence of different linkers onto the binding. Calculations are performed with density functional theory including dispersion corrections. The translational, rotational and vibrational contributions are taken into account and solvation effects including counter ions are investigated by applying the COSMO-RS method, which is based on a continuum solvation model. The calculated energies agree well with the experimentally determined ones. The shortest investigated linker shows an enhanced binding strength due to electronic effects, namely the dispersion interaction between the linkers from the guest and the host. For the longer linkers this ideal packing is not possible due to steric hindrance. |
format | Online Article Text |
id | pubmed-4464336 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Beilstein-Institut |
record_format | MEDLINE/PubMed |
spelling | pubmed-44643362015-06-29 First principle investigation of the linker length effects on the thermodynamics of divalent pseudorotaxanes Achazi, Andreas J Mollenhauer, Doreen Paulus, Beate Beilstein J Org Chem Full Research Paper The Gibbs energies of association (Gibbs free (binding) energies) for divalent crown-8/ammonium pseudorotaxanes are determined by investigating the influence of different linkers onto the binding. Calculations are performed with density functional theory including dispersion corrections. The translational, rotational and vibrational contributions are taken into account and solvation effects including counter ions are investigated by applying the COSMO-RS method, which is based on a continuum solvation model. The calculated energies agree well with the experimentally determined ones. The shortest investigated linker shows an enhanced binding strength due to electronic effects, namely the dispersion interaction between the linkers from the guest and the host. For the longer linkers this ideal packing is not possible due to steric hindrance. Beilstein-Institut 2015-05-08 /pmc/articles/PMC4464336/ /pubmed/26124872 http://dx.doi.org/10.3762/bjoc.11.78 Text en Copyright © 2015, Achazi et al. https://creativecommons.org/licenses/by/2.0https://www.beilstein-journals.org/bjoc/termsThis is an Open Access article under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The license is subject to the Beilstein Journal of Organic Chemistry terms and conditions: (https://www.beilstein-journals.org/bjoc/terms) |
spellingShingle | Full Research Paper Achazi, Andreas J Mollenhauer, Doreen Paulus, Beate First principle investigation of the linker length effects on the thermodynamics of divalent pseudorotaxanes |
title | First principle investigation of the linker length effects on the thermodynamics of divalent pseudorotaxanes |
title_full | First principle investigation of the linker length effects on the thermodynamics of divalent pseudorotaxanes |
title_fullStr | First principle investigation of the linker length effects on the thermodynamics of divalent pseudorotaxanes |
title_full_unstemmed | First principle investigation of the linker length effects on the thermodynamics of divalent pseudorotaxanes |
title_short | First principle investigation of the linker length effects on the thermodynamics of divalent pseudorotaxanes |
title_sort | first principle investigation of the linker length effects on the thermodynamics of divalent pseudorotaxanes |
topic | Full Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4464336/ https://www.ncbi.nlm.nih.gov/pubmed/26124872 http://dx.doi.org/10.3762/bjoc.11.78 |
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