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Three-dimensional Nanowire Structures for Ultra-Fast Separation of DNA, Protein and RNA Molecules

Separation and analysis of biomolecules represent crucial processes for biological and biomedical engineering development; however, separation resolution and speed for biomolecules analysis still require improvements. To achieve separation and analysis of biomolecules in a short time, the use of hig...

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Autores principales: Rahong, Sakon, Yasui, Takao, Yanagida, Takeshi, Nagashima, Kazuki, Kanai, Masaki, Meng, Gang, He, Yong, Zhuge, Fuwei, Kaji, Noritada, Kawai, Tomoji, Baba, Yoshinobu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4466590/
https://www.ncbi.nlm.nih.gov/pubmed/26073192
http://dx.doi.org/10.1038/srep10584
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author Rahong, Sakon
Yasui, Takao
Yanagida, Takeshi
Nagashima, Kazuki
Kanai, Masaki
Meng, Gang
He, Yong
Zhuge, Fuwei
Kaji, Noritada
Kawai, Tomoji
Baba, Yoshinobu
author_facet Rahong, Sakon
Yasui, Takao
Yanagida, Takeshi
Nagashima, Kazuki
Kanai, Masaki
Meng, Gang
He, Yong
Zhuge, Fuwei
Kaji, Noritada
Kawai, Tomoji
Baba, Yoshinobu
author_sort Rahong, Sakon
collection PubMed
description Separation and analysis of biomolecules represent crucial processes for biological and biomedical engineering development; however, separation resolution and speed for biomolecules analysis still require improvements. To achieve separation and analysis of biomolecules in a short time, the use of highly-ordered nanostructures fabricated by top-down or bottom-up approaches have been proposed. Here, we reported on the use of three-dimensional (3D) nanowire structures embedded in microchannels fabricated by a bottom-up approach for ultrafast separation of small biomolecules, such as DNA, protein, and RNA molecules. The 3D nanowire structures could analyze a mixture of DNA molecules (50–1000 bp) within 50 s, a mixture of protein molecules (20–340 kDa) within 5 s, and a mixture of RNA molecules (100–1000 bases) within 25 s. And, we could observe the electrophoretic mobility difference of biomolecules as a function of molecular size in the 3D nanowire structures. Since the present methodology allows users to control the pore size of sieving materials by varying the number of cycles for nanowire growth, the 3D nanowire structures have a good potential for use as alternatives for other sieving materials.
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spelling pubmed-44665902015-06-18 Three-dimensional Nanowire Structures for Ultra-Fast Separation of DNA, Protein and RNA Molecules Rahong, Sakon Yasui, Takao Yanagida, Takeshi Nagashima, Kazuki Kanai, Masaki Meng, Gang He, Yong Zhuge, Fuwei Kaji, Noritada Kawai, Tomoji Baba, Yoshinobu Sci Rep Article Separation and analysis of biomolecules represent crucial processes for biological and biomedical engineering development; however, separation resolution and speed for biomolecules analysis still require improvements. To achieve separation and analysis of biomolecules in a short time, the use of highly-ordered nanostructures fabricated by top-down or bottom-up approaches have been proposed. Here, we reported on the use of three-dimensional (3D) nanowire structures embedded in microchannels fabricated by a bottom-up approach for ultrafast separation of small biomolecules, such as DNA, protein, and RNA molecules. The 3D nanowire structures could analyze a mixture of DNA molecules (50–1000 bp) within 50 s, a mixture of protein molecules (20–340 kDa) within 5 s, and a mixture of RNA molecules (100–1000 bases) within 25 s. And, we could observe the electrophoretic mobility difference of biomolecules as a function of molecular size in the 3D nanowire structures. Since the present methodology allows users to control the pore size of sieving materials by varying the number of cycles for nanowire growth, the 3D nanowire structures have a good potential for use as alternatives for other sieving materials. Nature Publishing Group 2015-06-15 /pmc/articles/PMC4466590/ /pubmed/26073192 http://dx.doi.org/10.1038/srep10584 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0
spellingShingle Article
Rahong, Sakon
Yasui, Takao
Yanagida, Takeshi
Nagashima, Kazuki
Kanai, Masaki
Meng, Gang
He, Yong
Zhuge, Fuwei
Kaji, Noritada
Kawai, Tomoji
Baba, Yoshinobu
Three-dimensional Nanowire Structures for Ultra-Fast Separation of DNA, Protein and RNA Molecules
title Three-dimensional Nanowire Structures for Ultra-Fast Separation of DNA, Protein and RNA Molecules
title_full Three-dimensional Nanowire Structures for Ultra-Fast Separation of DNA, Protein and RNA Molecules
title_fullStr Three-dimensional Nanowire Structures for Ultra-Fast Separation of DNA, Protein and RNA Molecules
title_full_unstemmed Three-dimensional Nanowire Structures for Ultra-Fast Separation of DNA, Protein and RNA Molecules
title_short Three-dimensional Nanowire Structures for Ultra-Fast Separation of DNA, Protein and RNA Molecules
title_sort three-dimensional nanowire structures for ultra-fast separation of dna, protein and rna molecules
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4466590/
https://www.ncbi.nlm.nih.gov/pubmed/26073192
http://dx.doi.org/10.1038/srep10584
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