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Microsatellite markers for the New Zealand endemic Myosotis pygmaea species group (Boraginaceae) amplify across species(1)

PREMISE OF THE STUDY: Microsatellite loci were developed as polymorphic markers for the New Zealand endemic Myosotis pygmaea species group (Boraginaceae) for use in species delimitation and population and conservation genetic studies. METHODS AND RESULTS: Illumina MiSeq sequencing was performed on g...

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Autores principales: Prebble, Jessica M., Tate, Jennifer A., Meudt, Heidi M., Symonds, V. Vaughan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4467761/
https://www.ncbi.nlm.nih.gov/pubmed/26082880
http://dx.doi.org/10.3732/apps.1500027
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author Prebble, Jessica M.
Tate, Jennifer A.
Meudt, Heidi M.
Symonds, V. Vaughan
author_facet Prebble, Jessica M.
Tate, Jennifer A.
Meudt, Heidi M.
Symonds, V. Vaughan
author_sort Prebble, Jessica M.
collection PubMed
description PREMISE OF THE STUDY: Microsatellite loci were developed as polymorphic markers for the New Zealand endemic Myosotis pygmaea species group (Boraginaceae) for use in species delimitation and population and conservation genetic studies. METHODS AND RESULTS: Illumina MiSeq sequencing was performed on genomic DNA from seedlings of M. drucei. From trimmed paired-end sequences >400 bp, 484 microsatellite loci were identified. Twelve of 48 microsatellite loci tested were found to be polymorphic and consistently scorable when screened on 53 individuals from four populations representing the geographic range of M. drucei. They also amplify in all other species in the M. pygmaea species group, i.e., M. antarctica, M. brevis, M. glauca, and M. pygmaea, as well as 18 other Myosotis species. CONCLUSIONS: These 12 polymorphic microsatellite markers establish an important resource for research and conservation of the M. pygmaea species group and potentially other Southern Hemisphere Myosotis.
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spelling pubmed-44677612015-06-16 Microsatellite markers for the New Zealand endemic Myosotis pygmaea species group (Boraginaceae) amplify across species(1) Prebble, Jessica M. Tate, Jennifer A. Meudt, Heidi M. Symonds, V. Vaughan Appl Plant Sci Primer Note PREMISE OF THE STUDY: Microsatellite loci were developed as polymorphic markers for the New Zealand endemic Myosotis pygmaea species group (Boraginaceae) for use in species delimitation and population and conservation genetic studies. METHODS AND RESULTS: Illumina MiSeq sequencing was performed on genomic DNA from seedlings of M. drucei. From trimmed paired-end sequences >400 bp, 484 microsatellite loci were identified. Twelve of 48 microsatellite loci tested were found to be polymorphic and consistently scorable when screened on 53 individuals from four populations representing the geographic range of M. drucei. They also amplify in all other species in the M. pygmaea species group, i.e., M. antarctica, M. brevis, M. glauca, and M. pygmaea, as well as 18 other Myosotis species. CONCLUSIONS: These 12 polymorphic microsatellite markers establish an important resource for research and conservation of the M. pygmaea species group and potentially other Southern Hemisphere Myosotis. Botanical Society of America 2015-06-09 /pmc/articles/PMC4467761/ /pubmed/26082880 http://dx.doi.org/10.3732/apps.1500027 Text en © 2015 Prebble et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Prebble, Jessica M.
Tate, Jennifer A.
Meudt, Heidi M.
Symonds, V. Vaughan
Microsatellite markers for the New Zealand endemic Myosotis pygmaea species group (Boraginaceae) amplify across species(1)
title Microsatellite markers for the New Zealand endemic Myosotis pygmaea species group (Boraginaceae) amplify across species(1)
title_full Microsatellite markers for the New Zealand endemic Myosotis pygmaea species group (Boraginaceae) amplify across species(1)
title_fullStr Microsatellite markers for the New Zealand endemic Myosotis pygmaea species group (Boraginaceae) amplify across species(1)
title_full_unstemmed Microsatellite markers for the New Zealand endemic Myosotis pygmaea species group (Boraginaceae) amplify across species(1)
title_short Microsatellite markers for the New Zealand endemic Myosotis pygmaea species group (Boraginaceae) amplify across species(1)
title_sort microsatellite markers for the new zealand endemic myosotis pygmaea species group (boraginaceae) amplify across species(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4467761/
https://www.ncbi.nlm.nih.gov/pubmed/26082880
http://dx.doi.org/10.3732/apps.1500027
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