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Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1)
PREMISE OF THE STUDY: Microsatellite markers were developed in Veratrum maackii (Melanthiaceae) to assess the pattern of population genetic structures across the species’ distribution. METHODS AND RESULTS: Ten polymorphic loci were isolated from V. maackii using 454 shotgun pyrosequencing and the bi...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4467762/ https://www.ncbi.nlm.nih.gov/pubmed/26082881 http://dx.doi.org/10.3732/apps.1500030 |
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author | Li, Yue Iijima, Satoshi Maki, Masayuki |
author_facet | Li, Yue Iijima, Satoshi Maki, Masayuki |
author_sort | Li, Yue |
collection | PubMed |
description | PREMISE OF THE STUDY: Microsatellite markers were developed in Veratrum maackii (Melanthiaceae) to assess the pattern of population genetic structures across the species’ distribution. METHODS AND RESULTS: Ten polymorphic loci were isolated from V. maackii using 454 shotgun pyrosequencing and the biotin capture method. The number of alleles per locus ranged from three to 19. The observed heterozygosity and expected heterozygosity ranged from 0.143 to 0.929 and 0.269 to 0.904, respectively. CONCLUSIONS: These newly developed microsatellite markers are useful for assessing the genetic diversity, population structure, and demographic history of V. maackii across its distribution range. |
format | Online Article Text |
id | pubmed-4467762 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-44677622015-06-16 Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1) Li, Yue Iijima, Satoshi Maki, Masayuki Appl Plant Sci Primer Note PREMISE OF THE STUDY: Microsatellite markers were developed in Veratrum maackii (Melanthiaceae) to assess the pattern of population genetic structures across the species’ distribution. METHODS AND RESULTS: Ten polymorphic loci were isolated from V. maackii using 454 shotgun pyrosequencing and the biotin capture method. The number of alleles per locus ranged from three to 19. The observed heterozygosity and expected heterozygosity ranged from 0.143 to 0.929 and 0.269 to 0.904, respectively. CONCLUSIONS: These newly developed microsatellite markers are useful for assessing the genetic diversity, population structure, and demographic history of V. maackii across its distribution range. Botanical Society of America 2015-06-05 /pmc/articles/PMC4467762/ /pubmed/26082881 http://dx.doi.org/10.3732/apps.1500030 Text en © 2015 Li et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Li, Yue Iijima, Satoshi Maki, Masayuki Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1) |
title | Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1) |
title_full | Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1) |
title_fullStr | Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1) |
title_full_unstemmed | Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1) |
title_short | Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1) |
title_sort | development and characterization of microsatellite markers for veratrum maackii (melanthiaceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4467762/ https://www.ncbi.nlm.nih.gov/pubmed/26082881 http://dx.doi.org/10.3732/apps.1500030 |
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