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Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1)

PREMISE OF THE STUDY: Microsatellite markers were developed in Veratrum maackii (Melanthiaceae) to assess the pattern of population genetic structures across the species’ distribution. METHODS AND RESULTS: Ten polymorphic loci were isolated from V. maackii using 454 shotgun pyrosequencing and the bi...

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Detalles Bibliográficos
Autores principales: Li, Yue, Iijima, Satoshi, Maki, Masayuki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4467762/
https://www.ncbi.nlm.nih.gov/pubmed/26082881
http://dx.doi.org/10.3732/apps.1500030
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author Li, Yue
Iijima, Satoshi
Maki, Masayuki
author_facet Li, Yue
Iijima, Satoshi
Maki, Masayuki
author_sort Li, Yue
collection PubMed
description PREMISE OF THE STUDY: Microsatellite markers were developed in Veratrum maackii (Melanthiaceae) to assess the pattern of population genetic structures across the species’ distribution. METHODS AND RESULTS: Ten polymorphic loci were isolated from V. maackii using 454 shotgun pyrosequencing and the biotin capture method. The number of alleles per locus ranged from three to 19. The observed heterozygosity and expected heterozygosity ranged from 0.143 to 0.929 and 0.269 to 0.904, respectively. CONCLUSIONS: These newly developed microsatellite markers are useful for assessing the genetic diversity, population structure, and demographic history of V. maackii across its distribution range.
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spelling pubmed-44677622015-06-16 Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1) Li, Yue Iijima, Satoshi Maki, Masayuki Appl Plant Sci Primer Note PREMISE OF THE STUDY: Microsatellite markers were developed in Veratrum maackii (Melanthiaceae) to assess the pattern of population genetic structures across the species’ distribution. METHODS AND RESULTS: Ten polymorphic loci were isolated from V. maackii using 454 shotgun pyrosequencing and the biotin capture method. The number of alleles per locus ranged from three to 19. The observed heterozygosity and expected heterozygosity ranged from 0.143 to 0.929 and 0.269 to 0.904, respectively. CONCLUSIONS: These newly developed microsatellite markers are useful for assessing the genetic diversity, population structure, and demographic history of V. maackii across its distribution range. Botanical Society of America 2015-06-05 /pmc/articles/PMC4467762/ /pubmed/26082881 http://dx.doi.org/10.3732/apps.1500030 Text en © 2015 Li et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Li, Yue
Iijima, Satoshi
Maki, Masayuki
Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1)
title Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1)
title_full Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1)
title_fullStr Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1)
title_full_unstemmed Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1)
title_short Development and characterization of microsatellite markers for Veratrum maackii (Melanthiaceae)(1)
title_sort development and characterization of microsatellite markers for veratrum maackii (melanthiaceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4467762/
https://www.ncbi.nlm.nih.gov/pubmed/26082881
http://dx.doi.org/10.3732/apps.1500030
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