Cargando…

Reimagining the microscope in the 21(st) century using the scalable adaptive graphics environment

BACKGROUND: Whole-slide imaging (WSI), while technologically mature, remains in the early adopter phase of the technology adoption lifecycle. One reason for this current situation is that current methods of visualizing and using WSI closely follow long-existing workflows for glass slides. We set out...

Descripción completa

Detalles Bibliográficos
Autores principales: Mateevitsi, Victor, Patel, Tushar, Leigh, Jason, Levy, Bruce
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Medknow Publications & Media Pvt Ltd 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4470015/
https://www.ncbi.nlm.nih.gov/pubmed/26110092
http://dx.doi.org/10.4103/2153-3539.158042
_version_ 1782376687774728192
author Mateevitsi, Victor
Patel, Tushar
Leigh, Jason
Levy, Bruce
author_facet Mateevitsi, Victor
Patel, Tushar
Leigh, Jason
Levy, Bruce
author_sort Mateevitsi, Victor
collection PubMed
description BACKGROUND: Whole-slide imaging (WSI), while technologically mature, remains in the early adopter phase of the technology adoption lifecycle. One reason for this current situation is that current methods of visualizing and using WSI closely follow long-existing workflows for glass slides. We set out to “reimagine” the digital microscope in the era of cloud computing by combining WSI with the rich collaborative environment of the Scalable Adaptive Graphics Environment (SAGE). SAGE is a cross-platform, open-source visualization and collaboration tool that enables users to access, display and share a variety of data-intensive information, in a variety of resolutions and formats, from multiple sources, on display walls of arbitrary size. METHODS: A prototype of a WSI viewer app in the SAGE environment was created. While not full featured, it enabled the testing of our hypothesis that these technologies could be blended together to change the essential nature of how microscopic images are utilized for patient care, medical education, and research. RESULTS: Using the newly created WSI viewer app, demonstration scenarios were created in the patient care and medical education scenarios. This included a live demonstration of a pathology consultation at the International Academy of Digital Pathology meeting in Boston in November 2014. CONCLUSIONS: SAGE is well suited to display, manipulate and collaborate using WSIs, along with other images and data, for a variety of purposes. It goes beyond how glass slides and current WSI viewers are being used today, changing the nature of digital pathology in the process. A fully developed WSI viewer app within SAGE has the potential to encourage the wider adoption of WSI throughout pathology.
format Online
Article
Text
id pubmed-4470015
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Medknow Publications & Media Pvt Ltd
record_format MEDLINE/PubMed
spelling pubmed-44700152015-06-24 Reimagining the microscope in the 21(st) century using the scalable adaptive graphics environment Mateevitsi, Victor Patel, Tushar Leigh, Jason Levy, Bruce J Pathol Inform Symposium – International Academy of Digital Pathology (IADP) BACKGROUND: Whole-slide imaging (WSI), while technologically mature, remains in the early adopter phase of the technology adoption lifecycle. One reason for this current situation is that current methods of visualizing and using WSI closely follow long-existing workflows for glass slides. We set out to “reimagine” the digital microscope in the era of cloud computing by combining WSI with the rich collaborative environment of the Scalable Adaptive Graphics Environment (SAGE). SAGE is a cross-platform, open-source visualization and collaboration tool that enables users to access, display and share a variety of data-intensive information, in a variety of resolutions and formats, from multiple sources, on display walls of arbitrary size. METHODS: A prototype of a WSI viewer app in the SAGE environment was created. While not full featured, it enabled the testing of our hypothesis that these technologies could be blended together to change the essential nature of how microscopic images are utilized for patient care, medical education, and research. RESULTS: Using the newly created WSI viewer app, demonstration scenarios were created in the patient care and medical education scenarios. This included a live demonstration of a pathology consultation at the International Academy of Digital Pathology meeting in Boston in November 2014. CONCLUSIONS: SAGE is well suited to display, manipulate and collaborate using WSIs, along with other images and data, for a variety of purposes. It goes beyond how glass slides and current WSI viewers are being used today, changing the nature of digital pathology in the process. A fully developed WSI viewer app within SAGE has the potential to encourage the wider adoption of WSI throughout pathology. Medknow Publications & Media Pvt Ltd 2015-06-03 /pmc/articles/PMC4470015/ /pubmed/26110092 http://dx.doi.org/10.4103/2153-3539.158042 Text en Copyright: © 2015 Mateevits V. http://creativecommons.org/licenses/by-nc-sa/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Symposium – International Academy of Digital Pathology (IADP)
Mateevitsi, Victor
Patel, Tushar
Leigh, Jason
Levy, Bruce
Reimagining the microscope in the 21(st) century using the scalable adaptive graphics environment
title Reimagining the microscope in the 21(st) century using the scalable adaptive graphics environment
title_full Reimagining the microscope in the 21(st) century using the scalable adaptive graphics environment
title_fullStr Reimagining the microscope in the 21(st) century using the scalable adaptive graphics environment
title_full_unstemmed Reimagining the microscope in the 21(st) century using the scalable adaptive graphics environment
title_short Reimagining the microscope in the 21(st) century using the scalable adaptive graphics environment
title_sort reimagining the microscope in the 21(st) century using the scalable adaptive graphics environment
topic Symposium – International Academy of Digital Pathology (IADP)
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4470015/
https://www.ncbi.nlm.nih.gov/pubmed/26110092
http://dx.doi.org/10.4103/2153-3539.158042
work_keys_str_mv AT mateevitsivictor reimaginingthemicroscopeinthe21stcenturyusingthescalableadaptivegraphicsenvironment
AT pateltushar reimaginingthemicroscopeinthe21stcenturyusingthescalableadaptivegraphicsenvironment
AT leighjason reimaginingthemicroscopeinthe21stcenturyusingthescalableadaptivegraphicsenvironment
AT levybruce reimaginingthemicroscopeinthe21stcenturyusingthescalableadaptivegraphicsenvironment