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Isolation of High-Quality Total RNA from Chinese Fir (Cunninghamia lanceolata (Lamb.) Hook)

RNA isolation with RNA in a high quantity is a basic analytical method in plant genetics, molecular biology and related physiological investigations. To understand the genetic and molecular biology of Chinese fir, sufficient high-quality total RNA must be obtained for cDNA library construction and o...

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Detalles Bibliográficos
Autores principales: Ma, Zhihui, Huang, Binlong, Xu, Shanshan, Chen, Yu, Li, Shubin, Lin, Sizu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4470689/
https://www.ncbi.nlm.nih.gov/pubmed/26083257
http://dx.doi.org/10.1371/journal.pone.0130234
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author Ma, Zhihui
Huang, Binlong
Xu, Shanshan
Chen, Yu
Li, Shubin
Lin, Sizu
author_facet Ma, Zhihui
Huang, Binlong
Xu, Shanshan
Chen, Yu
Li, Shubin
Lin, Sizu
author_sort Ma, Zhihui
collection PubMed
description RNA isolation with RNA in a high quantity is a basic analytical method in plant genetics, molecular biology and related physiological investigations. To understand the genetic and molecular biology of Chinese fir, sufficient high-quality total RNA must be obtained for cDNA library construction and other downstream molecular applications. However, extracting RNA from Chinese fir is difficult and often requires the modification of existing protocols. Chinese fir tissues containing large amounts of polysaccharides and polyphenol compounds and are one of the most difficult plant tissues for RNA isolation. Therefore, we developed a simple method for extracting high-quality RNA from Chinese fir tissues. RNA isolations were performed within two hours, RNA quality was measured for yield and purity. Total RNA obtained from this procedure was successfully used for cDNA library construction, RT-PCR and transcriptome sequencing. It was proven that extracted RNA was intact and suitable for downstream molecular applications, including RT-PCR and qPCR, and other downstream molecular applications. Thus, this protocol represents a simple, efficient, and low-cost method.
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spelling pubmed-44706892015-06-29 Isolation of High-Quality Total RNA from Chinese Fir (Cunninghamia lanceolata (Lamb.) Hook) Ma, Zhihui Huang, Binlong Xu, Shanshan Chen, Yu Li, Shubin Lin, Sizu PLoS One Research Article RNA isolation with RNA in a high quantity is a basic analytical method in plant genetics, molecular biology and related physiological investigations. To understand the genetic and molecular biology of Chinese fir, sufficient high-quality total RNA must be obtained for cDNA library construction and other downstream molecular applications. However, extracting RNA from Chinese fir is difficult and often requires the modification of existing protocols. Chinese fir tissues containing large amounts of polysaccharides and polyphenol compounds and are one of the most difficult plant tissues for RNA isolation. Therefore, we developed a simple method for extracting high-quality RNA from Chinese fir tissues. RNA isolations were performed within two hours, RNA quality was measured for yield and purity. Total RNA obtained from this procedure was successfully used for cDNA library construction, RT-PCR and transcriptome sequencing. It was proven that extracted RNA was intact and suitable for downstream molecular applications, including RT-PCR and qPCR, and other downstream molecular applications. Thus, this protocol represents a simple, efficient, and low-cost method. Public Library of Science 2015-06-17 /pmc/articles/PMC4470689/ /pubmed/26083257 http://dx.doi.org/10.1371/journal.pone.0130234 Text en © 2015 Ma et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Ma, Zhihui
Huang, Binlong
Xu, Shanshan
Chen, Yu
Li, Shubin
Lin, Sizu
Isolation of High-Quality Total RNA from Chinese Fir (Cunninghamia lanceolata (Lamb.) Hook)
title Isolation of High-Quality Total RNA from Chinese Fir (Cunninghamia lanceolata (Lamb.) Hook)
title_full Isolation of High-Quality Total RNA from Chinese Fir (Cunninghamia lanceolata (Lamb.) Hook)
title_fullStr Isolation of High-Quality Total RNA from Chinese Fir (Cunninghamia lanceolata (Lamb.) Hook)
title_full_unstemmed Isolation of High-Quality Total RNA from Chinese Fir (Cunninghamia lanceolata (Lamb.) Hook)
title_short Isolation of High-Quality Total RNA from Chinese Fir (Cunninghamia lanceolata (Lamb.) Hook)
title_sort isolation of high-quality total rna from chinese fir (cunninghamia lanceolata (lamb.) hook)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4470689/
https://www.ncbi.nlm.nih.gov/pubmed/26083257
http://dx.doi.org/10.1371/journal.pone.0130234
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