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Cluster Detection Tests in Spatial Epidemiology: A Global Indicator for Performance Assessment
In cluster detection of disease, the use of local cluster detection tests (CDTs) is current. These methods aim both at locating likely clusters and testing for their statistical significance. New or improved CDTs are regularly proposed to epidemiologists and must be subjected to performance assessme...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4472237/ https://www.ncbi.nlm.nih.gov/pubmed/26086911 http://dx.doi.org/10.1371/journal.pone.0130594 |
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author | Guttmann, Aline Li, Xinran Feschet, Fabien Gaudart, Jean Demongeot, Jacques Boire, Jean-Yves Ouchchane, Lemlih |
author_facet | Guttmann, Aline Li, Xinran Feschet, Fabien Gaudart, Jean Demongeot, Jacques Boire, Jean-Yves Ouchchane, Lemlih |
author_sort | Guttmann, Aline |
collection | PubMed |
description | In cluster detection of disease, the use of local cluster detection tests (CDTs) is current. These methods aim both at locating likely clusters and testing for their statistical significance. New or improved CDTs are regularly proposed to epidemiologists and must be subjected to performance assessment. Because location accuracy has to be considered, performance assessment goes beyond the raw estimation of type I or II errors. As no consensus exists for performance evaluations, heterogeneous methods are used, and therefore studies are rarely comparable. A global indicator of performance, which assesses both spatial accuracy and usual power, would facilitate the exploration of CDTs behaviour and help between-studies comparisons. The Tanimoto coefficient (TC) is a well-known measure of similarity that can assess location accuracy but only for one detected cluster. In a simulation study, performance is measured for many tests. From the TC, we here propose two statistics, the averaged TC and the cumulated TC, as indicators able to provide a global overview of CDTs performance for both usual power and location accuracy. We evidence the properties of these two indicators and the superiority of the cumulated TC to assess performance. We tested these indicators to conduct a systematic spatial assessment displayed through performance maps. |
format | Online Article Text |
id | pubmed-4472237 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-44722372015-06-29 Cluster Detection Tests in Spatial Epidemiology: A Global Indicator for Performance Assessment Guttmann, Aline Li, Xinran Feschet, Fabien Gaudart, Jean Demongeot, Jacques Boire, Jean-Yves Ouchchane, Lemlih PLoS One Research Article In cluster detection of disease, the use of local cluster detection tests (CDTs) is current. These methods aim both at locating likely clusters and testing for their statistical significance. New or improved CDTs are regularly proposed to epidemiologists and must be subjected to performance assessment. Because location accuracy has to be considered, performance assessment goes beyond the raw estimation of type I or II errors. As no consensus exists for performance evaluations, heterogeneous methods are used, and therefore studies are rarely comparable. A global indicator of performance, which assesses both spatial accuracy and usual power, would facilitate the exploration of CDTs behaviour and help between-studies comparisons. The Tanimoto coefficient (TC) is a well-known measure of similarity that can assess location accuracy but only for one detected cluster. In a simulation study, performance is measured for many tests. From the TC, we here propose two statistics, the averaged TC and the cumulated TC, as indicators able to provide a global overview of CDTs performance for both usual power and location accuracy. We evidence the properties of these two indicators and the superiority of the cumulated TC to assess performance. We tested these indicators to conduct a systematic spatial assessment displayed through performance maps. Public Library of Science 2015-06-18 /pmc/articles/PMC4472237/ /pubmed/26086911 http://dx.doi.org/10.1371/journal.pone.0130594 Text en © 2015 Guttmann et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Guttmann, Aline Li, Xinran Feschet, Fabien Gaudart, Jean Demongeot, Jacques Boire, Jean-Yves Ouchchane, Lemlih Cluster Detection Tests in Spatial Epidemiology: A Global Indicator for Performance Assessment |
title | Cluster Detection Tests in Spatial Epidemiology: A Global Indicator for Performance Assessment |
title_full | Cluster Detection Tests in Spatial Epidemiology: A Global Indicator for Performance Assessment |
title_fullStr | Cluster Detection Tests in Spatial Epidemiology: A Global Indicator for Performance Assessment |
title_full_unstemmed | Cluster Detection Tests in Spatial Epidemiology: A Global Indicator for Performance Assessment |
title_short | Cluster Detection Tests in Spatial Epidemiology: A Global Indicator for Performance Assessment |
title_sort | cluster detection tests in spatial epidemiology: a global indicator for performance assessment |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4472237/ https://www.ncbi.nlm.nih.gov/pubmed/26086911 http://dx.doi.org/10.1371/journal.pone.0130594 |
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