Cargando…
Point-by-point compositional analysis for atom probe tomography
This new alternate approach to data processing for analyses that traditionally employed grid-based counting methods is necessary because it removes a user-imposed coordinate system that not only limits an analysis but also may introduce errors. We have modified the widely used “binomial” analysis fo...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4472836/ https://www.ncbi.nlm.nih.gov/pubmed/26150928 http://dx.doi.org/10.1016/j.mex.2014.02.001 |
_version_ | 1782377126654115840 |
---|---|
author | Stephenson, Leigh T. Ceguerra, Anna V. Li, Tong Rojhirunsakool, Tanaporn Nag, Soumya Banerjee, Rajarshi Cairney, Julie M. Ringer, Simon P. |
author_facet | Stephenson, Leigh T. Ceguerra, Anna V. Li, Tong Rojhirunsakool, Tanaporn Nag, Soumya Banerjee, Rajarshi Cairney, Julie M. Ringer, Simon P. |
author_sort | Stephenson, Leigh T. |
collection | PubMed |
description | This new alternate approach to data processing for analyses that traditionally employed grid-based counting methods is necessary because it removes a user-imposed coordinate system that not only limits an analysis but also may introduce errors. We have modified the widely used “binomial” analysis for APT data by replacing grid-based counting with coordinate-independent nearest neighbour identification, improving the measurements and the statistics obtained, allowing quantitative analysis of smaller datasets, and datasets from non-dilute solid solutions. It also allows better visualisation of compositional fluctuations in the data. Our modifications include:. • using spherical k-atom blocks identified by each detected atom's first k nearest neighbours. • 3D data visualisation of block composition and nearest neighbour anisotropy. • using z-statistics to directly compare experimental and expected composition curves. Similar modifications may be made to other grid-based counting analyses (contingency table, Langer-Bar-on-Miller, sinusoidal model) and could be instrumental in developing novel data visualisation options. |
format | Online Article Text |
id | pubmed-4472836 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-44728362015-07-06 Point-by-point compositional analysis for atom probe tomography Stephenson, Leigh T. Ceguerra, Anna V. Li, Tong Rojhirunsakool, Tanaporn Nag, Soumya Banerjee, Rajarshi Cairney, Julie M. Ringer, Simon P. MethodsX Article This new alternate approach to data processing for analyses that traditionally employed grid-based counting methods is necessary because it removes a user-imposed coordinate system that not only limits an analysis but also may introduce errors. We have modified the widely used “binomial” analysis for APT data by replacing grid-based counting with coordinate-independent nearest neighbour identification, improving the measurements and the statistics obtained, allowing quantitative analysis of smaller datasets, and datasets from non-dilute solid solutions. It also allows better visualisation of compositional fluctuations in the data. Our modifications include:. • using spherical k-atom blocks identified by each detected atom's first k nearest neighbours. • 3D data visualisation of block composition and nearest neighbour anisotropy. • using z-statistics to directly compare experimental and expected composition curves. Similar modifications may be made to other grid-based counting analyses (contingency table, Langer-Bar-on-Miller, sinusoidal model) and could be instrumental in developing novel data visualisation options. Elsevier 2014-03-05 /pmc/articles/PMC4472836/ /pubmed/26150928 http://dx.doi.org/10.1016/j.mex.2014.02.001 Text en Crown Copyright © 2014 Published by Elsevier B.V. http://creativecommons.org/licenses/by/3.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Article Stephenson, Leigh T. Ceguerra, Anna V. Li, Tong Rojhirunsakool, Tanaporn Nag, Soumya Banerjee, Rajarshi Cairney, Julie M. Ringer, Simon P. Point-by-point compositional analysis for atom probe tomography |
title | Point-by-point compositional analysis for atom probe tomography |
title_full | Point-by-point compositional analysis for atom probe tomography |
title_fullStr | Point-by-point compositional analysis for atom probe tomography |
title_full_unstemmed | Point-by-point compositional analysis for atom probe tomography |
title_short | Point-by-point compositional analysis for atom probe tomography |
title_sort | point-by-point compositional analysis for atom probe tomography |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4472836/ https://www.ncbi.nlm.nih.gov/pubmed/26150928 http://dx.doi.org/10.1016/j.mex.2014.02.001 |
work_keys_str_mv | AT stephensonleight pointbypointcompositionalanalysisforatomprobetomography AT ceguerraannav pointbypointcompositionalanalysisforatomprobetomography AT litong pointbypointcompositionalanalysisforatomprobetomography AT rojhirunsakooltanaporn pointbypointcompositionalanalysisforatomprobetomography AT nagsoumya pointbypointcompositionalanalysisforatomprobetomography AT banerjeerajarshi pointbypointcompositionalanalysisforatomprobetomography AT cairneyjuliem pointbypointcompositionalanalysisforatomprobetomography AT ringersimonp pointbypointcompositionalanalysisforatomprobetomography |