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A joint individual-based model coupling growth and mortality reveals that tree vigor is a key component of tropical forest dynamics

Tree vigor is often used as a covariate when tree mortality is predicted from tree growth in tropical forest dynamic models, but it is rarely explicitly accounted for in a coherent modeling framework. We quantify tree vigor at the individual tree level, based on the difference between expected and o...

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Autores principales: Aubry-Kientz, Mélaine, Rossi, Vivien, Boreux, Jean-Jacques, Hérault, Bruno
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BlackWell Publishing Ltd 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4475377/
https://www.ncbi.nlm.nih.gov/pubmed/26120434
http://dx.doi.org/10.1002/ece3.1532
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author Aubry-Kientz, Mélaine
Rossi, Vivien
Boreux, Jean-Jacques
Hérault, Bruno
author_facet Aubry-Kientz, Mélaine
Rossi, Vivien
Boreux, Jean-Jacques
Hérault, Bruno
author_sort Aubry-Kientz, Mélaine
collection PubMed
description Tree vigor is often used as a covariate when tree mortality is predicted from tree growth in tropical forest dynamic models, but it is rarely explicitly accounted for in a coherent modeling framework. We quantify tree vigor at the individual tree level, based on the difference between expected and observed growth. The available methods to join nonlinear tree growth and mortality processes are not commonly used by forest ecologists so that we develop an inference methodology based on an MCMC approach, allowing us to sample the parameters of the growth and mortality model according to their posterior distribution using the joint model likelihood. We apply our framework to a set of data on the 20-year dynamics of a forest in Paracou, French Guiana, taking advantage of functional trait-based growth and mortality models already developed independently. Our results showed that growth and mortality are intimately linked and that the vigor estimator is an essential predictor of mortality, highlighting that trees growing more than expected have a far lower probability of dying. Our joint model methodology is sufficiently generic to be used to join two longitudinal and punctual linked processes and thus may be applied to a wide range of growth and mortality models. In the context of global changes, such joint models are urgently needed in tropical forests to analyze, and then predict, the effects of the ongoing changes on the tree dynamics in hyperdiverse tropical forests.
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spelling pubmed-44753772015-06-26 A joint individual-based model coupling growth and mortality reveals that tree vigor is a key component of tropical forest dynamics Aubry-Kientz, Mélaine Rossi, Vivien Boreux, Jean-Jacques Hérault, Bruno Ecol Evol Original Research Tree vigor is often used as a covariate when tree mortality is predicted from tree growth in tropical forest dynamic models, but it is rarely explicitly accounted for in a coherent modeling framework. We quantify tree vigor at the individual tree level, based on the difference between expected and observed growth. The available methods to join nonlinear tree growth and mortality processes are not commonly used by forest ecologists so that we develop an inference methodology based on an MCMC approach, allowing us to sample the parameters of the growth and mortality model according to their posterior distribution using the joint model likelihood. We apply our framework to a set of data on the 20-year dynamics of a forest in Paracou, French Guiana, taking advantage of functional trait-based growth and mortality models already developed independently. Our results showed that growth and mortality are intimately linked and that the vigor estimator is an essential predictor of mortality, highlighting that trees growing more than expected have a far lower probability of dying. Our joint model methodology is sufficiently generic to be used to join two longitudinal and punctual linked processes and thus may be applied to a wide range of growth and mortality models. In the context of global changes, such joint models are urgently needed in tropical forests to analyze, and then predict, the effects of the ongoing changes on the tree dynamics in hyperdiverse tropical forests. BlackWell Publishing Ltd 2015-06 2015-05-29 /pmc/articles/PMC4475377/ /pubmed/26120434 http://dx.doi.org/10.1002/ece3.1532 Text en © 2015 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Aubry-Kientz, Mélaine
Rossi, Vivien
Boreux, Jean-Jacques
Hérault, Bruno
A joint individual-based model coupling growth and mortality reveals that tree vigor is a key component of tropical forest dynamics
title A joint individual-based model coupling growth and mortality reveals that tree vigor is a key component of tropical forest dynamics
title_full A joint individual-based model coupling growth and mortality reveals that tree vigor is a key component of tropical forest dynamics
title_fullStr A joint individual-based model coupling growth and mortality reveals that tree vigor is a key component of tropical forest dynamics
title_full_unstemmed A joint individual-based model coupling growth and mortality reveals that tree vigor is a key component of tropical forest dynamics
title_short A joint individual-based model coupling growth and mortality reveals that tree vigor is a key component of tropical forest dynamics
title_sort joint individual-based model coupling growth and mortality reveals that tree vigor is a key component of tropical forest dynamics
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4475377/
https://www.ncbi.nlm.nih.gov/pubmed/26120434
http://dx.doi.org/10.1002/ece3.1532
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