Cargando…
IRcall and IRclassifier: two methods for flexible detection of intron retention events from RNA-Seq data
BACKGROUND: The emergence of next-generation RNA sequencing (RNA-Seq) provides tremendous opportunities for researchers to analyze alternative splicing on a genome-wide scale. However, accurate detection of intron retention (IR) events from RNA-Seq data has remained an unresolved challenge in next-g...
Autores principales: | Bai, Yang, Ji, Shufan, Wang, Yadong |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4476074/ https://www.ncbi.nlm.nih.gov/pubmed/25707295 http://dx.doi.org/10.1186/1471-2164-16-S2-S9 |
Ejemplares similares
-
Detection of splicing events and multiread locations from RNA-seq data based on a geometric-tail (GT) distribution of intron length
por: Lou, Shao-Ke, et al.
Publicado: (2011) -
Intron Retention as a Mode for RNA-Seq Data Analysis
por: Zheng, Jian-Tao, et al.
Publicado: (2020) -
iREAD: a tool for intron retention detection from RNA-seq data
por: Li, Hong-Dong, et al.
Publicado: (2020) -
KISSPLICE: de-novo calling alternative splicing events from RNA-seq data
por: Sacomoto, Gustavo AT, et al.
Publicado: (2012) -
Towards barcode markers in Fungi: an intron map of Ascomycota mitochondria
por: Santamaria, Monica, et al.
Publicado: (2009)