Cargando…

Structural insights into catalysis and dimerization enhanced exonuclease activity of RNase J

RNase J is a conserved ribonuclease that belongs to the β-CASP family of nucleases. It possesses both endo- and exo-ribonuclease activities, which play a key role in pre-rRNA maturation and mRNA decay. Here we report high-resolution crystal structures of Deinococcus radiodurans RNase J complexed wit...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zhao, Ye, Lu, Meihua, Zhang, Hui, Hu, Jing, Zhou, Congli, Xu, Qiang, Ul Hussain Shah, Amir Miraj, Xu, Hong, Wang, Liangyan, Hua, Yuejin
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2015
Materias:	Nucleic Acid Enzymes
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4477667/ https://www.ncbi.nlm.nih.gov/pubmed/25940620 http://dx.doi.org/10.1093/nar/gkv444

Ejemplares similares

Participation of RecJ in the base excision repair pathway of Deinococcus radiodurans
por: Cheng, Kaiying, et al.
Publicado: (2020)

RNase AM, a 5′ to 3′ exonuclease, matures the 5′ end of all three ribosomal RNAs in E. coli
por: Jain, Chaitanya
Publicado: (2020)

Cross-subunit catalysis and a new phenomenon of recessive resurrection in Escherichia coli RNase E
por: Ali, Nida, et al.
Publicado: (2020)

Mechanistic decoupling of exonuclease III multifunctionality into AP endonuclease and exonuclease activities at the single-residue level
por: Lee, Donghun, et al.
Publicado: (2022)

The recognition of structured elements by a conserved groove distant from domains associated with catalysis is an essential determinant of RNase E
por: Clarke, Justin E, et al.
Publicado: (2023)

Molecular cloning and characterization of the human RNase κ, an ortholog of Cc RNase
por: Economopoulou, Marie-angela I., et al.
Publicado: (2007)

The hSNM1 protein is a DNA 5′-exonuclease
por: Hejna, James, et al.
Publicado: (2007)

Staphylococcus epidermidis Csm1 is a 3′–5′ exonuclease
por: Ramia, Nancy F., et al.
Publicado: (2014)

Yeast mitochondrial RNase P, RNase Z and the RNA degradosome are part of a stable supercomplex
por: Daoud, Rachid, et al.
Publicado: (2012)

RNase MRP RNA and RNase P activity in plants are associated with a Pop1p containing complex
por: Krehan, Mario, et al.
Publicado: (2012)

Crystal structures of Escherichia coli exonuclease I in complex with single-stranded DNA provide insights into the mechanism of processive digestion
por: Korada, Sai Krishna C., et al.
Publicado: (2013)

E. coli RNase I exhibits a strong Ca(2+)-dependent inherent double-stranded RNase activity
por: Grünberg, Sebastian, et al.
Publicado: (2021)

Crystal structure of a pre-chemistry viral RNA-dependent RNA polymerase suggests participation of two basic residues in catalysis
por: Li, Rui, et al.
Publicado: (2022)

Nucleoside alpha-thiotriphosphates, polymerases and the exonuclease III analysis of oligonucleotides containing phosphorothioate linkages
por: Yang, Zunyi, et al.
Publicado: (2007)

Myg1 exonuclease couples the nuclear and mitochondrial translational programs through RNA processing
por: Grover, Ritika, et al.
Publicado: (2019)

Noncanonical prokaryotic X family DNA polymerases lack polymerase activity and act as exonucleases
por: Prostova, Maria, et al.
Publicado: (2022)

DNA binding induces active site conformational change in the human TREX2 3′-exonuclease
por: de Silva, Udesh, et al.
Publicado: (2009)

Allosteric ring assembly and chemo-mechanical melting by the interaction between 5′-phosphate and λ exonuclease
por: Yoo, Jungmin, et al.
Publicado: (2015)

NrnA is a 5′-3′ exonuclease that processes short RNA substrates in vivo and in vitro
por: Weiss, Cordelia A, et al.
Publicado: (2022)

Molecular interactions of Escherichia coli ExoIX and identification of its associated 3′–5′ exonuclease activity
por: Hodskinson, Michael R. G., et al.
Publicado: (2007)

Proofreading exonuclease activity of human DNA polymerase δ and its effects on lesion-bypass DNA synthesis
por: Fazlieva, Ruzaliya, et al.
Publicado: (2009)

The trimeric Hef-associated nuclease HAN is a 3′→5′ exonuclease and is probably involved in DNA repair
por: Feng, Lei, et al.
Publicado: (2018)

Heterodimerization of the human RNase P/MRP subunits Rpp20 and Rpp25 is a prerequisite for interaction with the P3 arm of RNase MRP RNA
por: Hands-Taylor, Katherine L. D., et al.
Publicado: (2010)

Sequence-specific cleavage of dsRNA by Mini-III RNase
por: Głów, Dawid, et al.
Publicado: (2015)

RNase H sequence preferences influence antisense oligonucleotide efficiency
por: Kiełpiński, Łukasz J., et al.
Publicado: (2017)

Characterization of human herpesvirus 6A/B U94 as ATPase, helicase, exonuclease and DNA-binding proteins
por: Trempe, Frédéric, et al.
Publicado: (2015)

Mammalian PNLDC1 is a novel poly(A) specific exonuclease with discrete expression during early development
por: Anastasakis, Dimitrios, et al.
Publicado: (2016)

Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis
por: Fang, Ming, et al.
Publicado: (2009)

RNase L restricts the mobility of engineered retrotransposons in cultured human cells
por: Zhang, Ao, et al.
Publicado: (2014)

The 3′–5′ proofreading exonuclease of archaeal family-B DNA polymerase hinders the copying of template strand deaminated bases
por: Russell, Henry J., et al.
Publicado: (2009)

Significant contribution of the 3′→5′ exonuclease activity to the high fidelity of nucleotide incorporation catalyzed by human DNA polymerase ϵ
por: Zahurancik, Walter J., et al.
Publicado: (2014)

Molecular recognition of RhlB and RNase D in the Caulobacter crescentus RNA degradosome
por: Voss, Jarrod E., et al.
Publicado: (2014)

Coordination between the polymerase and RNase H activity of HIV-1 reverse transcriptase
por: Figiel, Małgorzata, et al.
Publicado: (2017)

Identification of two conserved aspartic acid residues required for DNA digestion by a novel thermophilic Exonuclease VII in Thermotoga maritima
por: Larrea, Andres A., et al.
Publicado: (2008)

Molecular insights into HSD10 disease: impact of SDR5C1 mutations on the human mitochondrial RNase P complex
por: Vilardo, Elisa, et al.
Publicado: (2015)

Specialization of an Exonuclease III family enzyme in the repair of 3′ DNA lesions during base excision repair in the human pathogen Neisseria meningitidis
por: Silhan, Jan, et al.
Publicado: (2012)

Noncanonical substrate preference of lambda exonuclease for 5′-nonphosphate-ended dsDNA and a mismatch-induced acceleration effect on the enzymatic reaction
por: Wu, Tongbo, et al.
Publicado: (2018)

Downstream element determines RNase Y cleavage of the saePQRS operon in Staphylococcus aureus
por: Marincola, Gabriella, et al.
Publicado: (2017)

Saccharomyces cerevisiae Ngl3p is an active 3′–5′ exonuclease with a specificity towards poly-A RNA reminiscent of cellular deadenylases
por: Feddersen, Ane, et al.
Publicado: (2012)

DNA stabilization at the Bacillus subtilis PolX core—a binding model to coordinate polymerase, AP-endonuclease and 3′-5′ exonuclease activities
por: Baños, Benito, et al.
Publicado: (2012)

Cannot write session to /tmp/vufind_sessions/sess_bfl1nj9n49oq2mdrotsriatg98